Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_pT_A02
         (696 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_03_0111 - 10129531-10129563,10129645-10129812,10130366-101304...    54   1e-07
04_04_0755 + 27812097-27812144,27812377-27812462,27812976-278130...    53   3e-07
02_05_0224 + 26948263-26948520,26948831-26948907,26949597-269496...    52   3e-07
03_03_0010 + 13712339-13712392,13712506-13712582,13712715-137127...    46   4e-05
06_01_0600 + 4332886-4332896,4332968-4333067,4333588-4333664,433...    44   2e-04

>11_03_0111 -
           10129531-10129563,10129645-10129812,10130366-10130484,
           10130589-10130650,10131043-10131119,10131659-10131838
          Length = 212

 Score = 54.0 bits (124), Expect = 1e-07
 Identities = 22/46 (47%), Positives = 30/46 (65%)
 Frame = -3

Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLDLVKSLEK 557
           K ++GG  G  IKWNFTKF++ KDG  V R+ P T PL +   ++K
Sbjct: 162 KSQKGGFLGDGIKWNFTKFLVGKDGKVVERYAPTTSPLKIENDIQK 207


>04_04_0755 +
           27812097-27812144,27812377-27812462,27812976-27813037,
           27813256-27813374,27813511-27813678,27813766-27813798
          Length = 171

 Score = 52.8 bits (121), Expect = 3e-07
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = -3

Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLDLVKSLEK 557
           K  +GG  G  IKWNF+KF++ K+G  V R+ P T PL + K ++K
Sbjct: 121 KSNKGGLFGDSIKWNFSKFLVDKEGRVVDRYAPTTSPLSIEKDIKK 166


>02_05_0224 +
           26948263-26948520,26948831-26948907,26949597-26949658,
           26949797-26949915,26950326-26950493,26950587-26950619
          Length = 238

 Score = 52.4 bits (120), Expect = 3e-07
 Identities = 21/46 (45%), Positives = 30/46 (65%)
 Frame = -3

Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLDLVKSLEK 557
           K  +GG  G  IKWNF+KF++ K+G  V R+ P T PL + K ++K
Sbjct: 188 KSSKGGLFGDNIKWNFSKFLVDKEGRVVERYAPTTSPLSMEKDIKK 233


>03_03_0010 +
           13712339-13712392,13712506-13712582,13712715-13712776,
           13713231-13713349,13714928-13715095,13715183-13715212
          Length = 169

 Score = 45.6 bits (103), Expect = 4e-05
 Identities = 23/49 (46%), Positives = 31/49 (63%), Gaps = 4/49 (8%)
 Frame = -3

Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPL----DLVKSLE 560
           K  + G  GS IKWNFTKF+I K+G  + R+   T PL    D++K+LE
Sbjct: 120 KASKPGLFGSRIKWNFTKFLIDKNGKVINRYSTATSPLSFEKDILKALE 168


>06_01_0600 +
           4332886-4332896,4332968-4333067,4333588-4333664,
           4333774-4333835,4334016-4334134,4334237-4334404,
           4335004-4335123
          Length = 218

 Score = 43.6 bits (98), Expect = 2e-04
 Identities = 17/40 (42%), Positives = 22/40 (55%)
 Frame = -3

Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLDL 575
           K   GG  G  +KWNF KF++ K G  V R+ P T P  +
Sbjct: 139 KSSAGGFLGDLVKWNFEKFLVDKTGKVVERYPPTTSPFQI 178


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,991,881
Number of Sequences: 37544
Number of extensions: 260358
Number of successful extensions: 400
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1780264028
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)