Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_A02
(696 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical p... 54 1e-07
U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical pr... 51 9e-07
Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical pr... 50 1e-06
AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical ... 41 0.001
AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical ... 31 1.0
Z73971-9|CAH04730.1| 522|Caenorhabditis elegans Hypothetical pr... 30 1.4
Z73971-8|CAA98250.1| 488|Caenorhabditis elegans Hypothetical pr... 30 1.4
AY532645-1|AAS21318.1| 522|Caenorhabditis elegans egg laying de... 30 1.4
U64598-1|AAK39215.2| 330|Caenorhabditis elegans Serpentine rece... 29 3.2
Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z81522-2|CAB04238.1| 415|Caenorhabditis elegans Hypothetical pr... 28 5.5
Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical pr... 27 9.7
AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b prot... 27 9.7
>Z81070-10|CAB03004.1| 163|Caenorhabditis elegans Hypothetical
protein F26E4.12 protein.
Length = 163
Score = 53.6 bits (123), Expect = 1e-07
Identities = 21/46 (45%), Positives = 32/46 (69%)
Frame = -3
Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLDLVKSLEK 557
K+++GG IKWNFTKF++ +DG + R GP TDP D+ K +++
Sbjct: 112 KNEKGGFMFDAIKWNFTKFLVGRDGKIIKRFGPTTDPKDMEKDIKE 157
>U51994-1|AAA96064.1| 193|Caenorhabditis elegans Hypothetical
protein R03G5.5 protein.
Length = 193
Score = 50.8 bits (116), Expect = 9e-07
Identities = 26/56 (46%), Positives = 35/56 (62%)
Frame = -3
Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLDLVKSLEKYW*KILAQTK 527
K +QGGT IKWNFTKF++ + G V R GP+T+P KS E+ K+L + K
Sbjct: 141 KKEQGGTLFDAIKWNFTKFLVNRQGKVVARFGPSTNP----KSFEEEIVKLLDENK 192
>Z83119-3|CAB05581.1| 163|Caenorhabditis elegans Hypothetical
protein R05H10.5 protein.
Length = 163
Score = 50.4 bits (115), Expect = 1e-06
Identities = 20/45 (44%), Positives = 29/45 (64%)
Frame = -3
Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLDLVKSLE 560
K ++GG IKWNFTKF++ +DG + R P T+P D+ K +E
Sbjct: 112 KQEKGGFLVDAIKWNFTKFLVGRDGHVIKRFSPTTEPKDMKKDIE 156
>AF047660-2|AAQ01522.1| 188|Caenorhabditis elegans Hypothetical
protein T09A12.2b protein.
Length = 188
Score = 40.7 bits (91), Expect = 0.001
Identities = 15/46 (32%), Positives = 30/46 (65%)
Frame = -3
Query: 694 KHKQGGTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLDLVKSLEK 557
K ++G + + I WNF+KF++ K+G V R+ + +P+DL + + +
Sbjct: 139 KKERGSSLSADIPWNFSKFLVDKNGHVVGRYSHSVNPIDLEEEISR 184
>AC006644-1|AAF39836.1| 145|Caenorhabditis elegans Hypothetical
protein F55A3.5 protein.
Length = 145
Score = 30.7 bits (66), Expect = 1.0
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -3
Query: 679 GTXGSFIKWNFTKFIIXKDGVPVXRHGPNTDPLD 578
G G I +NFTKF + KDG + R T P D
Sbjct: 93 GILGDSICYNFTKFFVGKDGHVIKRFCRTTLPKD 126
>Z73971-9|CAH04730.1| 522|Caenorhabditis elegans Hypothetical
protein C50H2.2a protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 212 LKSI*FL*KLLCIYVFRKTGDIKTRRIFKCSALYMLVNIIQLKLRHFKIAKNSGYTRNVS 391
L+SI FL +LL I F T D K+RR ++ L+ L + + +A N
Sbjct: 110 LRSILFLFRLLAI--FPATTDRKSRRKRNHRSIIKLI----LYVNYIVLA----VLLNSF 159
Query: 392 TFIQNY-IMLFYKYPFNDTHTDFVFRLQFAIKPITKLFLI 508
N+ +++ YK+ F HT V + A KP+ +F+I
Sbjct: 160 LIKMNFKVLMLYKHKFGLMHTGTVASMITATKPVINVFVI 199
>Z73971-8|CAA98250.1| 488|Caenorhabditis elegans Hypothetical
protein C50H2.2b protein.
Length = 488
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 212 LKSI*FL*KLLCIYVFRKTGDIKTRRIFKCSALYMLVNIIQLKLRHFKIAKNSGYTRNVS 391
L+SI FL +LL I F T D K+RR ++ L+ L + + +A N
Sbjct: 76 LRSILFLFRLLAI--FPATTDRKSRRKRNHRSIIKLI----LYVNYIVLA----VLLNSF 125
Query: 392 TFIQNY-IMLFYKYPFNDTHTDFVFRLQFAIKPITKLFLI 508
N+ +++ YK+ F HT V + A KP+ +F+I
Sbjct: 126 LIKMNFKVLMLYKHKFGLMHTGTVASMITATKPVINVFVI 165
>AY532645-1|AAS21318.1| 522|Caenorhabditis elegans egg laying
defective EGL-47A protein.
Length = 522
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 1/100 (1%)
Frame = +2
Query: 212 LKSI*FL*KLLCIYVFRKTGDIKTRRIFKCSALYMLVNIIQLKLRHFKIAKNSGYTRNVS 391
L+SI FL +LL I F T D K+RR ++ L+ L + + +A N
Sbjct: 110 LRSILFLFRLLAI--FPATTDRKSRRKRNHRSIIKLI----LYVNYIVLA----VLLNSF 159
Query: 392 TFIQNY-IMLFYKYPFNDTHTDFVFRLQFAIKPITKLFLI 508
N+ +++ YK+ F HT V + A KP+ +F+I
Sbjct: 160 LIKMNFKVLMLYKHKFGLMHTGTVASMITATKPVINVFVI 199
>U64598-1|AAK39215.2| 330|Caenorhabditis elegans Serpentine
receptor, class v protein6 protein.
Length = 330
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 4/77 (5%)
Frame = +2
Query: 254 VFRKTGDIKTRRIFKCSALYMLVNIIQLKLRHFKIAKNSGYTRNV-STFIQNYIM---LF 421
VF+KTG R +F S L V ++ L ++ KI + G N+ S + +Y M ++
Sbjct: 216 VFKKTGATAERSLFISSFLSFCVLMLNLTVQILKICISLGGMTNIFSVYDVSYPMVDLMY 275
Query: 422 YKYPFNDTHTDFVFRLQ 472
YP+ T V R Q
Sbjct: 276 SHYPWVLLVTSSVLRRQ 292
>Z81015-7|CAB02659.3| 223|Caenorhabditis elegans Hypothetical
protein C11E4.1 protein.
Length = 223
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 667 SFIKWNFTKFIIXKDGVPVXRHGP 596
S I WNF KF+I ++G P R P
Sbjct: 178 SDITWNFEKFLIDRNGQPRFRFHP 201
>Z81015-1|CAB02655.1| 224|Caenorhabditis elegans Hypothetical
protein C11E4.2 protein.
Length = 224
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = -3
Query: 667 SFIKWNFTKFIIXKDGVPVXRHGP 596
S I WNF KF+I ++G P R P
Sbjct: 179 SDITWNFEKFLIDRNGQPRFRFHP 202
>Z81522-2|CAB04238.1| 415|Caenorhabditis elegans Hypothetical
protein F32B4.1 protein.
Length = 415
Score = 28.3 bits (60), Expect = 5.5
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +2
Query: 308 LYMLVNIIQLKLRHFKIAKNSGYTRNVSTF 397
L L N L++RHF K GY RN+ ++
Sbjct: 159 LKALENSCILEIRHFNFTKYPGYVRNLKSY 188
>Z49888-1|CAA90064.1| 3498|Caenorhabditis elegans Hypothetical
protein F47A4.2 protein.
Length = 3498
Score = 27.5 bits (58), Expect = 9.7
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Frame = +2
Query: 236 KLLCIYVFRKTGDIKTRRIFKCSALYMLV----NIIQLKLRHFKIAKNSGYTRNVSTFIQ 403
KLLCI F + + + + + L + I L + +K +N R +T
Sbjct: 158 KLLCILGFNSSSKTQKKTLLDVATLELSQACNKTTIWLVTQLYKSFRNP-IKRREATKTW 216
Query: 404 NYIMLFYKYPFNDTHTDFVFRLQFAIKPITKLFLIKGY 517
NY+ F KY F+D D L + +LFL K +
Sbjct: 217 NYLTGFMKYMFDDGVLDKQEFLNDLTEVFNQLFLQKNF 254
>AC006666-1|AAK21417.1| 339|Caenorhabditis elegans Cyclin b protein
2.2 protein.
Length = 339
Score = 27.5 bits (58), Expect = 9.7
Identities = 19/77 (24%), Positives = 39/77 (50%)
Frame = +3
Query: 81 THHLFIFIS*T*NIVLKNILIKSAYYLFXXXXXXXXXXXXRLFI*NQYDFYRSCSVFMYS 260
T HL IF+ I++KNI+ K+ + L +++ + + Y + +S
Sbjct: 105 TLHLTIFV--LDRIIVKNIVSKAEFQLLGVAALFVASKFEDIYLPDILE-YELITENTFS 161
Query: 261 EKQVI*KQEEYLNAVHF 311
+KQ++ ++ LNA++F
Sbjct: 162 KKQILAMEQTILNALNF 178
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,402,100
Number of Sequences: 27780
Number of extensions: 289844
Number of successful extensions: 497
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 497
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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