Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_pT_A01
(629 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein S8|Schizosaccha... 228 6e-61
SPAC521.05 |rps802|rps8-2|40S ribosomal protein S8|Schizosacchar... 227 1e-60
SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase ki... 28 0.97
SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16 |S... 28 1.3
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 28 1.3
SPCC132.01c ||SPCC1322.17c|DUF814 family protein|Schizosaccharom... 27 2.2
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 27 2.2
SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyce... 26 3.9
SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces ... 26 5.2
SPAC139.03 |||transcription factor, zf-fungal binuclear cluster ... 26 5.2
SPBC16H5.10c |prp43||ATP-dependent RNA helicase Prp43|Schizosacc... 26 5.2
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 25 6.8
SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces... 25 6.8
SPAC25H1.06 |||histone acetyltransferase complex subunit |Schizo... 25 6.8
SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr 1|... 25 6.8
SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit ... 25 9.0
>SPAC2C4.16c |rps801|rps8-1|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 228 bits (557), Expect = 6e-61
Identities = 116/193 (60%), Positives = 138/193 (71%)
Frame = -2
Query: 580 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 401
MGI+RD HKR ATG KRA RKKRK+ELGR +NTR+GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 400 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 221
D+GNFSWGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 220 LGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 41
+G KG K T +S+ RK+ AR +KV+ ALE QF GRL A V+SRPG
Sbjct: 121 MG-SKGKKATSTP-----NPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPG 174
Query: 40 QCGRADGDX*EGK 2
Q GR DG EG+
Sbjct: 175 QSGRCDGYILEGE 187
>SPAC521.05 |rps802|rps8-2|40S ribosomal protein
S8|Schizosaccharomyces pombe|chr 1|||Manual
Length = 200
Score = 227 bits (555), Expect = 1e-60
Identities = 116/193 (60%), Positives = 138/193 (71%)
Frame = -2
Query: 580 MGISRDHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 401
MGI+RD HKR ATG KRA RKKRK+ELGR +NTR+GP+RIH VR RGGN K+RALRL
Sbjct: 1 MGITRDSRHKRSATGAKRAQYRKKRKFELGRQPSNTRIGPKRIHEVRVRGGNKKFRALRL 60
Query: 400 DTGNFSWGSECSTRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLP 221
D+GNFSWGSE ++KTRII V Y+ SNNELVRT TL K+AIV +DA PFR WYE+HY +
Sbjct: 61 DSGNFSWGSEGVSKKTRIIQVAYHPSNNELVRTNTLTKSAIVQIDAAPFRVWYETHYGIL 120
Query: 220 LGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQFHTGRLLACVASRPG 41
+G KG K T +S+ RK+ AR +KV+ ALE QF GRL A V+SRPG
Sbjct: 121 MG-SKGKKATATP-----TPKSKHVQRKHSARLGDSKVDSALETQFAAGRLYAVVSSRPG 174
Query: 40 QCGRADGDX*EGK 2
Q GR DG EG+
Sbjct: 175 QSGRCDGYILEGE 187
>SPAC1006.09 |win1|SPAC1250.06c, SPAPJ730.01|MAP kinase kinase kinase
Win1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1436
Score = 28.3 bits (60), Expect = 0.97
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 2/76 (2%)
Frame = -2
Query: 568 RDHWHKRRATGGKRAPIRKKRKY--ELGRPAANTRLGPQRIHSVRSRGGNTKYRALRLDT 395
RD +K + G K+ + EL +N + Q+ + S T YRA+ LDT
Sbjct: 1083 RDRLYKSQLIGRVLDDTTKENRLLKELASSKSNITIRWQQGGLIGSGSFGTVYRAVNLDT 1142
Query: 394 GNFSWGSECSTRKTRI 347
G+ E + K RI
Sbjct: 1143 GDLMAVKEVALHKPRI 1158
>SPAC890.03 |ppk16|mug92|serine/threonine protein kinase Ppk16
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 672
Score = 27.9 bits (59), Expect = 1.3
Identities = 26/83 (31%), Positives = 39/83 (46%)
Frame = -2
Query: 487 PAANTRLGPQRIHSVRSRGGNTKYRALRLDTGNFSWGSECSTRKTRIIDVVYNASNNELV 308
P NT + PQ RSR T R+L +G S S ++ +TR V +AS+N L+
Sbjct: 530 PLQNTVISPQPTR--RSR---TPIRSL---SGRSSVASSRNSSRTRSYSNVSSASSNSLI 581
Query: 307 RTKTLVKNAIVVVDATPFRQWYE 239
+ ++ V TPF +E
Sbjct: 582 SIISSKPSSSTVQRQTPFHSPFE 604
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.9 bits (59), Expect = 1.3
Identities = 17/54 (31%), Positives = 26/54 (48%)
Frame = -2
Query: 565 DHWHKRRATGGKRAPIRKKRKYELGRPAANTRLGPQRIHSVRSRGGNTKYRALR 404
+ W K T K+ +KRK L R A RL + + S+ S+GG +A +
Sbjct: 32 EKWSKGVKTN-KKEQEAEKRKAALERKAERERLEKEEMESLPSKGGKGSKKAAK 84
>SPCC132.01c ||SPCC1322.17c|DUF814 family
protein|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1021
Score = 27.1 bits (57), Expect = 2.2
Identities = 16/73 (21%), Positives = 33/73 (45%)
Frame = -2
Query: 265 ATPFRQWYESHYTLPLGRKKGAKLTEAEEAIINKKRSQKTARKYLARQRLAKVEGALEEQ 86
+TP + H KKG+K+ A++ ++R + AR+ A + K ++E+
Sbjct: 754 STPDTTGSDIHIVSEKRGKKGSKVITAKKVSAKERREARRARRQTALEESLKAPISIEDA 813
Query: 85 FHTGRLLACVASR 47
+LA + +
Sbjct: 814 TDPQTILAILKQK 826
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 27.1 bits (57), Expect = 2.2
Identities = 23/88 (26%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = -2
Query: 565 DHWHKRRATGGKRAPIRKKRKY-----ELGRPAANTRLGPQRIHSVRSRGGNTKYRALRL 401
D W +A G +PIR+ ++Y + +PA R H R K R + +
Sbjct: 758 DEWKASKAFGANDSPIRENKRYKHNKLQTPKPADKFR---DNYHKQNKRNREAKERGIGI 814
Query: 400 DTGNFSWGSECSTRKTRIIDVVYNASNN 317
N S RK R + A NN
Sbjct: 815 KV-NSELKSAVEIRKARELKEKRLAKNN 841
>SPBC27B12.04c |||conserved eukaryotic protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 817
Score = 26.2 bits (55), Expect = 3.9
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Frame = -2
Query: 382 WGSEC--STRKTRIIDVVYNASNNELVRTKTLVKNAIVVVDATPFRQWYESHYTLPLGRK 209
WGS+ +K + +V+ +++ + +T L AT F + +S+Y +PL R+
Sbjct: 250 WGSQSYLQEKKAGLAEVLNISTSQQKPKTTALDYEVFRHEMATKFSSFADSYYPVPLDRE 309
Query: 208 K 206
+
Sbjct: 310 Q 310
>SPAC6G9.02c |nop9||RNA-binding protein Nop9|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 655
Score = 25.8 bits (54), Expect = 5.2
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = +1
Query: 4 CLLXCHHRRDHTDLGDSPRKPANAPCGIALLE 99
CLL H+RD + + RK N G LLE
Sbjct: 440 CLLRSKHKRDKANPENKERKLVNNLLGAQLLE 471
>SPAC139.03 |||transcription factor, zf-fungal binuclear cluster
type |Schizosaccharomyces pombe|chr 1|||Manual
Length = 625
Score = 25.8 bits (54), Expect = 5.2
Identities = 15/39 (38%), Positives = 19/39 (48%)
Frame = -2
Query: 592 DPTKMGISRDHWHKRRATGGKRAPIRKKRKYELGRPAAN 476
+ TK G + RRA A RKK K + GRP +N
Sbjct: 3 ETTKSGSKKSGQTSRRAIHSCLACRRKKLKCDHGRPCSN 41
>SPBC16H5.10c |prp43||ATP-dependent RNA helicase
Prp43|Schizosaccharomyces pombe|chr 2|||Manual
Length = 735
Score = 25.8 bits (54), Expect = 5.2
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +3
Query: 243 YHCLNGVASTTTIAFLTRVFVRTNS 317
++C N V S T + + VFVR NS
Sbjct: 518 FYCSNEVLSLTALLSVPNVFVRPNS 542
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = +3
Query: 321 LDALYTTSMIRVLRVEHSDPQEKLPVSRR 407
L+ + T S +V R H DP KLP RR
Sbjct: 193 LEGVKTKSGRKVHRPNHFDPLVKLPTRRR 221
>SPCC613.01 ||SPCC757.14|membrane transporter|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 497
Score = 25.4 bits (53), Expect = 6.8
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -2
Query: 616 SIICVFFFDPTKMGISRDHWHKRRATGGKRAPIRKKRKYEL 494
SI FF ++G + + K + GK AP+ K+K+ L
Sbjct: 271 SIFLSIFFKEVRVGNTATNVRKPESFTGKTAPLSFKQKFML 311
>SPAC25H1.06 |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 408
Score = 25.4 bits (53), Expect = 6.8
Identities = 8/19 (42%), Positives = 15/19 (78%)
Frame = +2
Query: 11 SXVTIGATTLTWATRHASQ 67
S +T+G T+L+W+ RH+ +
Sbjct: 327 SRLTLGGTSLSWSWRHSGR 345
>SPAPB1A10.05 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 285
Score = 25.4 bits (53), Expect = 6.8
Identities = 10/28 (35%), Positives = 13/28 (46%)
Frame = +2
Query: 530 FPTGGPSLMPVIPTNTHLSWVKKENTDY 613
+PT L+ PT H SW +E Y
Sbjct: 190 YPTDSKQLVKYHPTEVHPSWTVEEPVHY 217
>SPAC24C9.07c |bgs2|meu21, pgs2|1,3-beta-glucan synthase subunit
Bgs2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1894
Score = 25.0 bits (52), Expect = 9.0
Identities = 11/32 (34%), Positives = 16/32 (50%)
Frame = -3
Query: 474 PGSVLSVSTPFVHVVEILSTVRCVWTPVTSLG 379
P VLS P++ + L + C+W P LG
Sbjct: 682 PILVLSTMKPYLCNITFLGSHLCIWQPKILLG 713
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,524,094
Number of Sequences: 5004
Number of extensions: 50733
Number of successful extensions: 157
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 150
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 155
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 279695522
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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