Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_P24
         (652 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_02_0188 + 6251256-6251561                                           78   7e-15
09_02_0168 - 5253588-5254688                                           70   2e-12
01_06_1460 - 37519393-37519591,37519724-37519746,37519843-37519905     45   6e-05
08_02_1524 + 27657711-27657768,27658612-27658671,27658805-276588...    29   2.4  

>03_02_0188 + 6251256-6251561
          Length = 101

 Score = 77.8 bits (183), Expect = 7e-15
 Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 5/83 (6%)
 Frame = +1

Query: 169 IRNKLLTILESKHVQVINESYMHN----VPKGA-ETHFKVVVVSEKFDGLPLIKRHRLVN 333
           +R KL + LE+  + + + SY H     V   A ETHF + V+S KF+G  L+KRHR+V 
Sbjct: 16  MRQKLQSALEASALDIEDVSYQHAGHAAVKDNANETHFNIRVISPKFEGQSLVKRHRMVY 75

Query: 334 ELLAEELQNGVHALSIVAKTPKQ 402
           +LL +EL +G+HA+SIVAKTPK+
Sbjct: 76  DLLTDELNSGLHAISIVAKTPKE 98


>09_02_0168 - 5253588-5254688
          Length = 366

 Score = 69.7 bits (163), Expect = 2e-12
 Identities = 39/86 (45%), Positives = 52/86 (60%), Gaps = 5/86 (5%)
 Frame = +1

Query: 160 ESTIRNKLLTILESKHVQVINESYMHNVPKGA-----ETHFKVVVVSEKFDGLPLIKRHR 324
           +  I+  L   L    +Q+ + S++H    G      ETHF V VVSE F G  L+KRHR
Sbjct: 280 QERIKESLERGLSPVQLQIEDISHLHKGHAGVSGSNGETHFNVRVVSEAFQGKSLLKRHR 339

Query: 325 LVNELLAEELQNGVHALSIVAKTPKQ 402
            V +LL +EL+NG+HALSI AKTP +
Sbjct: 340 AVYDLLQDELKNGLHALSIDAKTPSE 365


>01_06_1460 - 37519393-37519591,37519724-37519746,37519843-37519905
          Length = 94

 Score = 44.8 bits (101), Expect = 6e-05
 Identities = 24/52 (46%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
 Frame = +1

Query: 250 GAETHFKVVVVSEKFDGLPLIKRHRLVNELLAEELQNGVHALSI-VAKTPKQ 402
           G    +++ VVSEKF+G  L++RHR+VN  LA  +   +HA+SI  A TP Q
Sbjct: 29  GCGASYEIEVVSEKFEGKRLLERHRMVNTALAPHMAE-IHAVSIKKALTPAQ 79


>08_02_1524 +
           27657711-27657768,27658612-27658671,27658805-27658890,
           27659343-27659963,27660460-27660618
          Length = 327

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 25/90 (27%), Positives = 45/90 (50%), Gaps = 2/90 (2%)
 Frame = +1

Query: 136 MSSASGIVESTIRNKLLTILESKHVQVINESYMHNVPKGAETHFK--VVVVSEKFDGLPL 309
           MS     +++ I++  +++ +  +      SY+  V K A+ HFK  V V S+K D   +
Sbjct: 166 MSEVFTELKAIIQDLQVSLRKGDNAVAKIHSYIRLVKK-AKKHFKKTVKVASDKED-CKI 223

Query: 310 IKRHRLVNELLAEELQNGVHALSIVAKTPK 399
           +KR     E+    L++ +H LS   + PK
Sbjct: 224 VKRLSKAREITTSLLESTMHLLSKQIQMPK 253


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,355,341
Number of Sequences: 37544
Number of extensions: 245889
Number of successful extensions: 461
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 459
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 461
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1620349964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)