Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_P24
(652 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063405-1|AAH63405.1| 137|Homo sapiens bolA homolog 1 (E. coli... 107 4e-23
AL591493-19|CAI12571.1| 137|Homo sapiens bolA homolog 1 (E. col... 107 4e-23
AF151901-1|AAD34138.1| 137|Homo sapiens CGI-143 protein protein. 107 4e-23
AF060511-1|AAG43129.1| 86|Homo sapiens My016 protein protein. 62 2e-09
BC130403-1|AAI30404.1| 124|Homo sapiens bolA homolog 2 (E. coli... 40 0.006
BC130401-1|AAI30402.1| 124|Homo sapiens bolA homolog 2 (E. coli... 40 0.006
BC062756-1|AAH62756.1| 58|Homo sapiens BOLA2 protein protein. 40 0.006
DQ225187-1|ABB04094.1| 107|Homo sapiens bolA-like 3 protein. 35 0.22
AC073263-3|AAX93059.1| 107|Homo sapiens unknown protein. 35 0.22
U71268-1|AAD00180.1| 575|Homo sapiens potential transcriptional... 31 3.6
U71267-1|AAD00179.1| 642|Homo sapiens potential transcriptional... 31 3.6
>BC063405-1|AAH63405.1| 137|Homo sapiens bolA homolog 1 (E. coli)
protein.
Length = 137
Score = 107 bits (256), Expect = 4e-23
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = +1
Query: 139 SSASGIVESTIRNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKR 318
S A G VE+ IR KL L + +++ NES H VP G+ETHF+V VVS +F+GL ++R
Sbjct: 26 SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85
Query: 319 HRLVNELLAEELQNGVHALSIVAKTPKQWEESDKLVENSPNCRGG 453
HRLV+ LAEEL VHAL+I A+TP QW E+ +L + SP C GG
Sbjct: 86 HRLVHAALAEELGGPVHALAIQARTPAQWRENSQL-DTSPPCLGG 129
>AL591493-19|CAI12571.1| 137|Homo sapiens bolA homolog 1 (E. coli)
protein.
Length = 137
Score = 107 bits (256), Expect = 4e-23
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = +1
Query: 139 SSASGIVESTIRNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKR 318
S A G VE+ IR KL L + +++ NES H VP G+ETHF+V VVS +F+GL ++R
Sbjct: 26 SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85
Query: 319 HRLVNELLAEELQNGVHALSIVAKTPKQWEESDKLVENSPNCRGG 453
HRLV+ LAEEL VHAL+I A+TP QW E+ +L + SP C GG
Sbjct: 86 HRLVHAALAEELGGPVHALAIQARTPAQWRENSQL-DTSPPCLGG 129
>AF151901-1|AAD34138.1| 137|Homo sapiens CGI-143 protein protein.
Length = 137
Score = 107 bits (256), Expect = 4e-23
Identities = 55/105 (52%), Positives = 72/105 (68%)
Frame = +1
Query: 139 SSASGIVESTIRNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKR 318
S A G VE+ IR KL L + +++ NES H VP G+ETHF+V VVS +F+GL ++R
Sbjct: 26 SGAIGPVEAAIRTKLEEALSPEVLELRNESGGHAVPPGSETHFRVAVVSSRFEGLSPLQR 85
Query: 319 HRLVNELLAEELQNGVHALSIVAKTPKQWEESDKLVENSPNCRGG 453
HRLV+ LAEEL VHAL+I A+TP QW E+ +L + SP C GG
Sbjct: 86 HRLVHAALAEELGGPVHALAIQARTPAQWRENSQL-DTSPPCLGG 129
>AF060511-1|AAG43129.1| 86|Homo sapiens My016 protein protein.
Length = 86
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/79 (44%), Positives = 48/79 (60%)
Frame = +1
Query: 169 IRNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNELLAE 348
+R KL LE++HV+V + + F+V+VVS KF+G PL++RHRLVN LAE
Sbjct: 8 LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRLVNACLAE 62
Query: 349 ELQNGVHALSIVAKTPKQW 405
EL + +HA TP QW
Sbjct: 63 ELPH-IHAFEQKTLTPDQW 80
>BC130403-1|AAI30404.1| 124|Homo sapiens bolA homolog 2 (E. coli)
protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.006
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 169 IRNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNE 336
+R KL LE++HV+V + + F+V+VVS KF+G PL++RHR E
Sbjct: 74 LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 124
>BC130401-1|AAI30402.1| 124|Homo sapiens bolA homolog 2 (E. coli)
protein.
Length = 124
Score = 40.3 bits (90), Expect = 0.006
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 169 IRNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNE 336
+R KL LE++HV+V + + F+V+VVS KF+G PL++RHR E
Sbjct: 74 LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 124
>BC062756-1|AAH62756.1| 58|Homo sapiens BOLA2 protein protein.
Length = 58
Score = 40.3 bits (90), Expect = 0.006
Identities = 22/56 (39%), Positives = 33/56 (58%)
Frame = +1
Query: 169 IRNKLLTILESKHVQVINESYMHNVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNE 336
+R KL LE++HV+V + + F+V+VVS KF+G PL++RHR E
Sbjct: 8 LREKLQRDLEAEHVEVEDTTLNR-----CSCSFRVLVVSAKFEGKPLLQRHRFCTE 58
>DQ225187-1|ABB04094.1| 107|Homo sapiens bolA-like 3 protein.
Length = 107
Score = 35.1 bits (77), Expect = 0.22
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +1
Query: 238 NVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNELLAEELQNGVHALSIVAKTPKQ 402
++ G +++ + SE+F +++H++VN+ L EE++ +H L I PK+
Sbjct: 54 DISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKE-MHGLRIFTSVPKR 107
>AC073263-3|AAX93059.1| 107|Homo sapiens unknown protein.
Length = 107
Score = 35.1 bits (77), Expect = 0.22
Identities = 15/55 (27%), Positives = 32/55 (58%)
Frame = +1
Query: 238 NVPKGAETHFKVVVVSEKFDGLPLIKRHRLVNELLAEELQNGVHALSIVAKTPKQ 402
++ G +++ + SE+F +++H++VN+ L EE++ +H L I PK+
Sbjct: 54 DISGGCGAMYEIKIESEEFKEKRTVQQHQMVNQALKEEIKE-MHGLRIFTSVPKR 107
>U71268-1|AAD00180.1| 575|Homo sapiens potential transcriptional
repressor NOT4Hp protein.
Length = 575
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 630 NHSSNNHLYTTQYNLHHTQPQIFSVILVNN*TIGLGLINY-VTSKAL 493
NH +++H +QY+ T Q+ +++L+NN LG + VT KAL
Sbjct: 369 NHRASSHQKQSQYHPLQTGKQLLALVLLNNQRDDLGFDPFDVTRKAL 415
>U71267-1|AAD00179.1| 642|Homo sapiens potential transcriptional
repressor NOT4Hp protein.
Length = 642
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = -2
Query: 630 NHSSNNHLYTTQYNLHHTQPQIFSVILVNN*TIGLGLINY-VTSKAL 493
NH +++H +QY+ T Q+ +++L+NN LG + VT KAL
Sbjct: 369 NHRASSHQKQSQYHPLQTGKQLLALVLLNNQRDDLGFDPFDVTRKAL 415
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 81,329,760
Number of Sequences: 237096
Number of extensions: 1470538
Number of successful extensions: 6022
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6022
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7253890590
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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