Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_P18
(707 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory recept... 22 4.3
AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory recept... 22 4.3
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 22 5.6
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 21 7.4
AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less prot... 21 7.4
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 9.8
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 9.8
>AM292380-1|CAL23192.2| 489|Tribolium castaneum gustatory receptor
candidate 59 protein.
Length = 489
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 338 FHFVFSPSLCIIREQL*LICLI 273
FH +F P LCI+ L ++ +
Sbjct: 276 FHDIFLPLLCILTNTLEILITV 297
>AM292346-1|CAL23158.2| 314|Tribolium castaneum gustatory receptor
candidate 25 protein.
Length = 314
Score = 22.2 bits (45), Expect = 4.3
Identities = 8/22 (36%), Positives = 13/22 (59%)
Frame = -1
Query: 338 FHFVFSPSLCIIREQL*LICLI 273
FH +F P LCI+ L ++ +
Sbjct: 101 FHDIFLPLLCILTNTLEILITV 122
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 68 NESEYGGVKDLRITPN 83
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 68 NESEYGGVKDLRITPN 83
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 68 NESEYGGVKDLRITPN 83
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 68 NESEYGGVKDLRITPN 83
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 21.8 bits (44), Expect = 5.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 68 NESEYGGVKDLRITPN 83
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 21.4 bits (43), Expect = 7.4
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -3
Query: 705 RYXHCLW 685
RY HCLW
Sbjct: 1293 RYLHCLW 1299
>AF317551-1|AAG39634.1| 312|Tribolium castaneum distal-less
protein.
Length = 312
Score = 21.4 bits (43), Expect = 7.4
Identities = 12/44 (27%), Positives = 17/44 (38%)
Frame = -3
Query: 681 EQVTSARVVCGIYRGPPTASCAEVCVDASISCTPPLRGVTNRFS 550
E+ TS RV + P A C D + +NRF+
Sbjct: 227 ERFTSDRVHAALVTSPRARPLARTCRDNRLLVLAGTSSPSNRFT 270
Score = 21.4 bits (43), Expect = 7.4
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 587 HEIEASTHTSAHEAVGGPRYIPQTTRADVTC 679
H I+ THT R P+TT A C
Sbjct: 272 HLIQRRTHTRHTTTSHNTRGTPRTTPASSRC 302
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 249 NVKGVVSMNETYELQLFSNDAERWREH 329
N +G+ ++NE Y+ L + + W E+
Sbjct: 321 NSEGLYAINEIYDNALLALLDDYWNEY 347
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 9.8
Identities = 8/27 (29%), Positives = 16/27 (59%)
Frame = +3
Query: 249 NVKGVVSMNETYELQLFSNDAERWREH 329
N +G+ ++NE Y+ L + + W E+
Sbjct: 321 NSEGLYAINEIYDNALLALLDDYWNEY 347
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,512
Number of Sequences: 336
Number of extensions: 4420
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18738900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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