Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_P18
         (707 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase Clp1/F...    49   6e-07
SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces po...    48   2e-06
SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase Pmp1|...    36   0.006
SPBC609.02 |ptn1||phosphatidylinositol-3,4,5-trisphosphate3-phos...    35   0.013
SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein Mam...    30   0.28 
SPBC8D2.05c |sfi1||spindle pole body protein Sfi1|Schizosaccharo...    28   1.1  
SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces pom...    27   2.6  
SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces ...    27   2.6  
SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyc...    27   2.6  
SPAC15E1.07c |moa1|mug159|meiotic cohesin complex associated pro...    27   3.5  
SPAC22E12.16c |pik1||phosphatidylinositol kinase Pik1|Schizosacc...    26   4.6  
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces...    26   6.1  
SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6 |Schi...    26   6.1  
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom...    25   8.0  
SPCC191.09c |gst1||glutathione S-transferase Gst1|Schizosaccharo...    25   8.0  

>SPAC1782.09c |clp1|flp1|Cdc14-related protein phosphatase
           Clp1/Flp1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 537

 Score = 49.2 bits (112), Expect = 6e-07
 Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
 Frame = +3

Query: 480 GTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHILLHTKQ-WEALDIFH 653
           G + VHCKAG  R+  L+G YL+ K+ ++ +E + YMR  RP +++  +Q W  ++  H
Sbjct: 280 GVIAVHCKAGLGRTGCLIGAYLIYKHCFTANEVIAYMRIMRPGMVVGPQQHWLHINQVH 338



 Score = 30.3 bits (65), Expect = 0.28
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = +3

Query: 510 RTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHIL 614
           R  +A L+ CY+++   W PH A+  +    P  L
Sbjct: 96  RANAACLLACYMVLVQNWPPHLALAPLAQAEPPFL 130


>SPBC17A3.06 |||phosphoprotein phosphatase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 330

 Score = 47.6 bits (108), Expect = 2e-06
 Identities = 21/42 (50%), Positives = 27/42 (64%)
 Frame = +3

Query: 486 VYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRPHI 611
           V VHC AG +RS TLV  YLM +N W+  EA+ ++  RR  I
Sbjct: 127 VLVHCFAGISRSVTLVAAYLMKENNWNTEEALSHINERRSGI 168


>SPBC1685.01 |pmp1||dual-specificity MAP kinase phosphatase
           Pmp1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 278

 Score = 35.9 bits (79), Expect = 0.006
 Identities = 21/63 (33%), Positives = 35/63 (55%)
 Frame = +3

Query: 423 LPLDNKLSGVPADVGQINTGTVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRR 602
           L LD  +S V  +  Q+N   V ++C+ G +RSA L+  ++M     +  +A EY++ R 
Sbjct: 134 LELDKLVSFVAYNAMQLNK-KVLINCQMGISRSACLMIAFIMKTLNLNVSDAYEYVKERS 192

Query: 603 PHI 611
           P I
Sbjct: 193 PWI 195


>SPBC609.02 |ptn1||phosphatidylinositol-3,4,
           5-trisphosphate3-phosphatase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 348

 Score = 34.7 bits (76), Expect = 0.013
 Identities = 14/40 (35%), Positives = 25/40 (62%)
 Frame = +3

Query: 483 TVYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRR 602
           T+ VHCKAG+ R+ T++  YL+   G +  +++E    +R
Sbjct: 124 TLVVHCKAGKGRTGTVICSYLVAFGGLTAKQSLELYTEKR 163


>SPAP11E10.02c |mam3|SPAPB1A10.01c|cell agglutination protein
           Mam3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1082

 Score = 30.3 bits (65), Expect = 0.28
 Identities = 32/133 (24%), Positives = 58/133 (43%)
 Frame = -2

Query: 535 PTSVALLVLPALQ*TYTVPVLICPTSAGTPDSLLSNGRNLFINTTPSNNLS*LGASKISV 356
           PTS     +  +Q       L C  +  +   + S+  +  IN+     +S    S+IS 
Sbjct: 103 PTSTVTEYVDRVQTVTEYVTLSCGQAFTSTVDISSSTSSSVINSPTGTAVS----SQIST 158

Query: 355 VANCRNSTLCSRHLSASLENNCSSYVSFIETTPFTFSSSFNCFVIP*KGRAPRITVSSIL 176
           ++   +ST      SAS+ +  +S VS++ + P   SSS N  ++     +P ++ S  L
Sbjct: 159 LSMSPSSTPVFSP-SASVSSKVASSVSYVSSEPSDSSSSTNTVILTTSVNSPAVSSSETL 217

Query: 175 SYQRLLVTFSMKT 137
           +   +  T S  T
Sbjct: 218 TSVSITSTESAYT 230


>SPBC8D2.05c |sfi1||spindle pole body protein
           Sfi1|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 840

 Score = 28.3 bits (60), Expect = 1.1
 Identities = 27/102 (26%), Positives = 42/102 (41%), Gaps = 13/102 (12%)
 Frame = +3

Query: 78  IRQSTAMFARVTFYPT-----LLYNVFMEKVTSRRWYDRID-------DTVILGALPFQG 221
           I+  TAMF R   Y +     LL N     +   R+Y +ID       D V    +  + 
Sbjct: 147 IKSQTAMFRRADQYRSQKDKILLANSLDFMLEKYRYYKKIDAVYLRKADAVYRAFIMLKY 206

Query: 222 MTKQLKEEENVKG-VVSMNETYELQLFSNDAERWREHKVEFL 344
             + +++  N++  + S  E Y L L      RWR+   E L
Sbjct: 207 FPRWVQKLRNIQSRIYSAGEAYRLILIGQMVNRWRQKTRERL 248


>SPBC3H7.09 |mug142||palmitoyltransferase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 350

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 685 VGAGHVRTCCLWNISRASHCFVCRSMCGRLD 593
           V   +  TC L+   RASHC +C +    LD
Sbjct: 179 VNTVYCHTCHLYRPPRASHCHLCDNCVEYLD 209


>SPBC17A3.03c |||phosphoprotein phosphatase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 263

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 11/40 (27%), Positives = 19/40 (47%)
 Frame = +3

Query: 486 VYVHCKAGRTRSATLVGCYLMMKNGWSPHEAVEYMRSRRP 605
           V +HC  G+ R+  ++GC   + N    +   EY+    P
Sbjct: 161 VLLHCSRGKHRTGIVIGCLRALMNWPVGNRLQEYISFSHP 200


>SPAC821.09 |eng1||endo-1,3-beta-glucanase Eng1|Schizosaccharomyces
            pombe|chr 1|||Manual
          Length = 1016

 Score = 27.1 bits (57), Expect = 2.6
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 660  VVCGIYRGPPTASCAEVCVDASI 592
            ++C I  G P  +C   C D+SI
Sbjct: 983  ILCPIINGSPLLACGNACYDSSI 1005


>SPAC15E1.07c |moa1|mug159|meiotic cohesin complex associated
           protein Moa1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 172

 Score = 26.6 bits (56), Expect = 3.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 466 PTSAGTPDSLLSNGRNLFINTT 401
           P +  TP S +  G NLF+N T
Sbjct: 96  PVATSTPKSCMRTGSNLFLNET 117


>SPAC22E12.16c |pik1||phosphatidylinositol kinase
           Pik1|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 851

 Score = 26.2 bits (55), Expect = 4.6
 Identities = 15/50 (30%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
 Frame = +3

Query: 216 QGMTKQLKEEENVKG------VVSMNETYELQLFSNDAERWREHKVEFLQ 347
           + +TKQL+E E  +G      VV++ + +  Q    ++ R+R+ +  FLQ
Sbjct: 644 KNLTKQLREAELAQGKIAGKNVVTLKDYFIKQFGDPNSSRYRQAQTNFLQ 693


>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 711

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 474 NTGTVYVHCKAGRTRSATLV 533
           N G ++VHC AG  R+ T +
Sbjct: 622 NDGPMFVHCSAGVGRTGTFI 641


>SPAC343.19 ||SPAC824.01|phosphatidylinositol 4-kinase Lsb6
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 624

 Score = 25.8 bits (54), Expect = 6.1
 Identities = 7/17 (41%), Positives = 14/17 (82%)
 Frame = +3

Query: 138 VFMEKVTSRRWYDRIDD 188
           +F+ K+TSR W++++ D
Sbjct: 450 LFLHKLTSREWWEKLSD 466


>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 308

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = +3

Query: 282 YELQLFSNDAERWREHKVEFLQLATTDI 365
           ++L + S    +W+EHK E + + T  +
Sbjct: 87  FDLTMPSKPIHKWKEHKAEIVAIDTNTV 114


>SPCC191.09c |gst1||glutathione S-transferase
           Gst1|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 229

 Score = 25.4 bits (53), Expect = 8.0
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +1

Query: 310 QRDGENTKWNSYSWPQQIFLRPPIKTNYSKES 405
           Q D E     +YSW Q++  RP  K  + + S
Sbjct: 193 QLDFEKEFPRTYSWHQRLLARPASKATFEERS 224


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,146,597
Number of Sequences: 5004
Number of extensions: 69093
Number of successful extensions: 192
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 192
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 329179816
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)