Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_P18
         (707 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    25   2.3  
AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinestera...    25   3.1  
AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinestera...    25   3.1  
AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinestera...    25   3.1  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    24   4.1  
AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical prote...    23   7.1  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.4  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    23   9.4  

>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
 Frame = -2

Query: 463 TSAGTPDSLLSNGRN----LFINTTPSNNLS*LGASKISVVANCRNSTLCSRHLSASLEN 296
           ++A   +S + NG N        TTP+N  +  G S  +   N  +S+ C+ H+S++  N
Sbjct: 120 SNAALSNSSVLNGSNSGSATTTTTTPTNPGNGNGGSNNN--NNSNSSSSCNNHVSSNTNN 177

Query: 295 N 293
           N
Sbjct: 178 N 178


>AJ515150-1|CAD56157.2|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 573 EAVEYMRSRRPHILLHTKQWEALDI 647
           +AVE +R + PH+L++  +W  L I
Sbjct: 423 DAVECLRGKDPHVLVN-NEWGTLGI 446


>AJ515149-1|CAD56156.1|  737|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 737

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 573 EAVEYMRSRRPHILLHTKQWEALDI 647
           +AVE +R + PH+L++  +W  L I
Sbjct: 423 DAVECLRGKDPHVLVN-NEWGTLGI 446


>AJ488492-1|CAD32684.2|  623|Anopheles gambiae acetylcholinesterase
           protein.
          Length = 623

 Score = 24.6 bits (51), Expect = 3.1
 Identities = 10/25 (40%), Positives = 17/25 (68%)
 Frame = +3

Query: 573 EAVEYMRSRRPHILLHTKQWEALDI 647
           +AVE +R + PH+L++  +W  L I
Sbjct: 309 DAVECLRGKDPHVLVN-NEWGTLGI 332


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 16/43 (37%), Positives = 24/43 (55%)
 Frame = +3

Query: 426 PLDNKLSGVPADVGQINTGTVYVHCKAGRTRSATLVGCYLMMK 554
           PL N + GV +++   N      + K G+ +SA LVG Y M+K
Sbjct: 42  PLGN-MKGVGSEI-HFNDVLNEAYAK-GKAQSAPLVGLYFMLK 81


>AJ439060-3|CAD27754.1| 1645|Anopheles gambiae hypothetical protein
            protein.
          Length = 1645

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 3/28 (10%)
 Frame = +1

Query: 466  GRSTPAPYTFTARRVGRGAPR---SWAA 540
            GRSTP     +++  G G PR   SWA+
Sbjct: 1362 GRSTPRELLESSQPAGGGTPRGRHSWAS 1389


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 77  NPAEYGNVRESYILPN 124
           N +EYG VR+  I PN
Sbjct: 88  NDSEYGGVRDLRITPN 103


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 77  NPAEYGNVRESYILPN 124
           N +EYG VR+  I PN
Sbjct: 88  NDSEYGGVRDLRITPN 103


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 824,352
Number of Sequences: 2352
Number of extensions: 18348
Number of successful extensions: 30
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)