Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_P18
(707 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor prot... 25 0.70
S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor prot... 24 1.2
DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor pr... 24 1.2
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 23 2.8
AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic ac... 23 3.7
AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase p... 22 5.0
AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase p... 22 5.0
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 22 6.6
>S76956-1|AAB33931.1| 168|Apis mellifera olfactory receptor
protein.
Length = 168
Score = 25.0 bits (52), Expect = 0.70
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -2
Query: 367 KISVVANCRNSTLCSRHLSASLENNCSSYVSFIETTPFTFSSSFN 233
++S CRN + CS H +A+ + + + +++ + TFS N
Sbjct: 106 RMSADGGCRNFSTCSSHPTAAFISYGTLFFIYVQPSA-TFSLDLN 149
>S76957-1|AAB33932.1| 169|Apis mellifera olfactory receptor
protein.
Length = 169
Score = 24.2 bits (50), Expect = 1.2
Identities = 12/45 (26%), Positives = 23/45 (51%)
Frame = -2
Query: 367 KISVVANCRNSTLCSRHLSASLENNCSSYVSFIETTPFTFSSSFN 233
++S CRN + CS H +A+ + + + ++ + TFS N
Sbjct: 107 RMSADGGCRNFSTCSSHPTAAFISYGTLFFIYVHPSA-TFSLDLN 150
>DQ869053-1|ABJ09600.1| 459|Apis mellifera capa-like receptor
protein.
Length = 459
Score = 24.2 bits (50), Expect = 1.2
Identities = 9/21 (42%), Positives = 13/21 (61%)
Frame = +2
Query: 623 EAVGGPRYIPQTTRADVTCSY 685
E V GP+Y+P T +T +Y
Sbjct: 20 EKVRGPKYLPLTLIVPITLTY 40
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/13 (69%), Positives = 11/13 (84%)
Frame = +3
Query: 225 TKQLKEEENVKGV 263
TKQ+K+E N KGV
Sbjct: 542 TKQIKDEANKKGV 554
>AY540846-1|AAS48080.1| 541|Apis mellifera neuronal nicotinic
acetylcholine receptorApisa2 subunit protein.
Length = 541
Score = 22.6 bits (46), Expect = 3.7
Identities = 8/13 (61%), Positives = 10/13 (76%)
Frame = +2
Query: 77 NPAEYGNVRESYI 115
+PAEYG V E Y+
Sbjct: 85 DPAEYGGVTELYV 97
>AY568009-1|AAS73299.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 207 LPFQGMTKQLKEEENVKGVV 266
L Q ++KQ+ EE+ KG++
Sbjct: 38 LQVQHISKQISEEQRYKGMI 57
>AY332626-1|AAQ24500.1| 300|Apis mellifera ADP/ATP translocase
protein.
Length = 300
Score = 22.2 bits (45), Expect = 5.0
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +3
Query: 207 LPFQGMTKQLKEEENVKGVV 266
L Q ++KQ+ EE+ KG++
Sbjct: 38 LQVQHISKQISEEQRYKGMI 57
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 51 NESEYGGVKDLRITPN 66
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 51 NESEYGGVKDLRITPN 66
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 51 NESEYGGVKDLRITPN 66
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 51 NESEYGGVKDLRITPN 66
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 51 NESEYGGVKDLRITPN 66
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 51 NESEYGGVKDLRITPN 66
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 119 NESEYGGVKDLRITPN 134
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 21.8 bits (44), Expect = 6.6
Identities = 8/16 (50%), Positives = 11/16 (68%)
Frame = +2
Query: 77 NPAEYGNVRESYILPN 124
N +EYG V++ I PN
Sbjct: 119 NESEYGGVKDLRITPN 134
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 214,658
Number of Sequences: 438
Number of extensions: 5042
Number of successful extensions: 21
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21804885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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