Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_P15
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    23   1.8  
AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like pr...    22   5.4  
AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    21   9.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   9.5  

>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 23.4 bits (48), Expect = 1.8
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -1

Query: 157 TIYFVFPMGIPFSEYYFAYTHNVRMYCT 74
           TI FV  +G  +   Y   T+N   YCT
Sbjct: 222 TINFVVLLGDLYVTLYIILTNNQAKYCT 249


>AY600514-1|AAT11862.1|  242|Tribolium castaneum iroquois-like
           protein protein.
          Length = 242

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = -1

Query: 664 SVGIHLFSYKGTLGRPSPMIGGRIVAFDPP 575
           SVG++   Y  T   P P IG    AF  P
Sbjct: 6   SVGVYGAPYPSTDQNPYPSIGVESSAFYSP 35


>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 505 PQRILLPRSRRRGVLCFL 558
           PQ +LLP+    G  C L
Sbjct: 582 PQHMLLPKGTEAGYPCHL 599


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/36 (33%), Positives = 14/36 (38%)
 Frame = -3

Query: 494 PASKT*RATDQMFSDVPLHDACRAYQEGS*MCRDYP 387
           PA     A      DVP   + R+  E    CRD P
Sbjct: 45  PAPPEEEAASPTPGDVPTPSSPRSISEDPLNCRDLP 80


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,852
Number of Sequences: 336
Number of extensions: 3313
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)