Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_P15
         (691 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_01_0027 - 225670-225870,225989-226126,226315-226392,226523-22...    33   0.21 
11_01_0027 - 199196-199396,199514-199651,200207-200284,200419-20...    33   0.21 
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194...    31   0.86 
10_07_0132 + 13263577-13263732,13265391-13265456,13265607-132657...    29   4.6  
07_03_1782 + 29477748-29478169,29478257-29478413,29478518-294786...    28   6.1  

>12_01_0027 -
           225670-225870,225989-226126,226315-226392,226523-226708,
           226853-226945,227797-227863,228660-228964
          Length = 355

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 544 HLVAATEVVESVAGQLFRRQKRNGPL-IKCFQTFLFTTHVGHIRKEVECVV 395
           HLV AT+    V G+ +R  +++GPL +  F   L +  V H   +V  VV
Sbjct: 285 HLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSDVGDVV 335


>11_01_0027 -
           199196-199396,199514-199651,200207-200284,200419-200604,
           200754-200846,201665-201731,202374-202675
          Length = 354

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
 Frame = -1

Query: 544 HLVAATEVVESVAGQLFRRQKRNGPL-IKCFQTFLFTTHVGHIRKEVECVV 395
           HLV AT+    V G+ +R  +++GPL +  F   L +  V H   +V  VV
Sbjct: 284 HLVEATKAARPVLGRYYREPEKSGPLPLHLFGVLLRSLRVDHFVSDVGDVV 334


>04_03_1002 - 21617339-21617362,21618476-21618565,21618755-21619432,
            21619536-21619772,21619849-21619896,21619995-21620045,
            21620301-21620426,21620557-21620697,21621165-21621401,
            21622467-21622571,21622812-21622982,21623306-21623380,
            21623754-21623936,21624151-21624297,21624365-21624472,
            21624605-21624709,21625109-21625213,21625322-21625381,
            21625512-21625579,21625876-21625954,21626208-21626267,
            21626445-21626498,21626834-21626886,21627405-21627494,
            21628265-21628362,21628464-21628852
          Length = 1193

 Score = 31.1 bits (67), Expect = 0.86
 Identities = 15/43 (34%), Positives = 24/43 (55%)
 Frame = +2

Query: 173  KMNQENESTEVNSENIASTSGVAKNGAAATLVMLKNARDAKMR 301
            ++ +E +  E++S+ +A  S  AK  AAA  V LKN  +   R
Sbjct: 943  RLAEEKDGLEIHSQKLAEESSYAKELAAAAAVELKNLAEEVTR 985


>10_07_0132 +
           13263577-13263732,13265391-13265456,13265607-13265705,
           13267020-13267084,13267210-13267294,13267389-13267422,
           13267539-13267642,13268085-13268408,13269090-13269605
          Length = 482

 Score = 28.7 bits (61), Expect = 4.6
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +3

Query: 621 RPSVPLYENKCMPTLGERRP 680
           +P V LY +KC  +LG RRP
Sbjct: 76  QPCVGLYSDKCTSSLGRRRP 95


>07_03_1782 +
           29477748-29478169,29478257-29478413,29478518-29478610,
           29478753-29478938,29479107-29479187,29479788-29479925,
           29480044-29480208
          Length = 413

 Score = 28.3 bits (60), Expect = 6.1
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = -1

Query: 544 HLVAATEVVESVAGQLFRRQKRNGP 470
           HL+ ATE  + V G+ +R   ++GP
Sbjct: 355 HLIEATEAAKGVMGKYYREPDKSGP 379


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,350,867
Number of Sequences: 37544
Number of extensions: 367576
Number of successful extensions: 807
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 786
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 807
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1756684372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)