Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_P05
         (741 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    28   0.069
EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic hor...    23   3.4  
DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic hor...    23   3.4  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   7.9  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 28.3 bits (60), Expect = 0.069
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 706 VITLVFKFFFNFSHMRPCCVWIRFCKEYDYLICFLF 599
           ++ LV  ++F + H+  CC +I F     +L+C  +
Sbjct: 252 LLLLVCIYYFYYMHLLFCCAFIIFTMHLLFLLCIYY 287


>EF222290-1|ABN79650.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 614 KVVIFLAKSNPNTTW 658
           ++V+F  +S+PN TW
Sbjct: 186 QMVVFHVESHPNITW 200


>DQ422965-1|ABE02225.1|  378|Tribolium castaneum adipokinetic
           hormone receptor protein.
          Length = 378

 Score = 22.6 bits (46), Expect = 3.4
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = +2

Query: 614 KVVIFLAKSNPNTTW 658
           ++V+F  +S+PN TW
Sbjct: 186 QMVVFHVESHPNITW 200


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 16/78 (20%), Positives = 33/78 (42%), Gaps = 4/78 (5%)
 Frame = +2

Query: 425 FVKVFVELKNVHTLPKEQVYCKLTDKSMELHVDNLENKDYLLV----INKLLEPINVADS 592
           F K   +++ VH +  +     L     +L + N   + +L++    +N +        S
Sbjct: 22  FTKKLEQMRQVHEVDNQ-----LKQMGCDLDIPNSVVQKHLILLMVLVNLIFNTCGEVFS 76

Query: 593 HWKQKTDKVVIFLAKSNP 646
            W +  D+++IFL    P
Sbjct: 77  AWVRCQDQILIFLVNWYP 94


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 165,791
Number of Sequences: 336
Number of extensions: 3697
Number of successful extensions: 16
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19884055
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)