Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_P04
         (768 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            23   7.9  
AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.           23   7.9  
AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.           23   7.9  
AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.           23   7.9  
AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.           23   7.9  
AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein prot...    23   7.9  

>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = +3

Query: 612  EVPRSAVVADGETTGLAEIQ 671
            E+PR AVV D +T    EIQ
Sbjct: 1114 EMPRHAVVYDTQTNNPQEIQ 1133


>AY334000-1|AAR01125.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 96  RSWRAYRNNIRYVIFEFEIGIRVL 25
           R W AYRN    V  EF +G+  L
Sbjct: 190 RDWVAYRNGFGSVDGEFWLGLERL 213


>AY333999-1|AAR01124.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 13/28 (46%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
 Frame = -1

Query: 96  RSWRAYRNNIRYVIFEFEIGI-RVLRPT 16
           R W AYRN    V  EF +G+ R+ R T
Sbjct: 190 RDWVAYRNGFGSVDGEFWLGLERIHRIT 217


>AY333998-1|AAR01123.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 96  RSWRAYRNNIRYVIFEFEIGIRVL 25
           R W AYRN    V  EF +G+  L
Sbjct: 190 RDWVAYRNGFGSVDGEFWLGLERL 213


>AY333997-1|AAR01122.1|  268|Anopheles gambiae FBN23 protein.
          Length = 268

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/24 (45%), Positives = 13/24 (54%)
 Frame = -1

Query: 96  RSWRAYRNNIRYVIFEFEIGIRVL 25
           R W AYRN    V  EF +G+  L
Sbjct: 190 RDWVAYRNGFGSVDGEFWLGLERL 213


>AJ419878-1|CAD12038.1|   77|Anopheles gambiae Sec61 protein
           protein.
          Length = 77

 Score = 23.4 bits (48), Expect = 7.9
 Identities = 11/31 (35%), Positives = 17/31 (54%)
 Frame = +2

Query: 497 RKILKRQAL*YTCLCLLHIMTWAKTPLFGTM 589
           RKI  R+ + +T + L   +   + PLFG M
Sbjct: 24  RKIQFREKVLWTAITLFIFLVCCQIPLFGIM 54


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 787,643
Number of Sequences: 2352
Number of extensions: 16045
Number of successful extensions: 39
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79834176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)