Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_P04
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132877-15|CAC70111.1| 628|Caenorhabditis elegans Hypothetical... 104 6e-23
Z78540-2|CAB01737.1| 900|Caenorhabditis elegans Hypothetical pr... 32 0.52
AL137227-6|CAB70236.2| 159|Caenorhabditis elegans Hypothetical ... 31 1.2
Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical pr... 30 2.1
Z83102-4|CAB05467.1| 259|Caenorhabditis elegans Hypothetical pr... 29 3.6
U15304-1|AAA50369.1| 407|Caenorhabditis elegans PES-10 protein. 29 3.6
AL110485-21|CAB60370.1| 407|Caenorhabditis elegans Hypothetical... 29 3.6
Z66498-3|CAA91293.2| 687|Caenorhabditis elegans Hypothetical pr... 28 6.4
>AL132877-15|CAC70111.1| 628|Caenorhabditis elegans Hypothetical
protein Y105E8B.9 protein.
Length = 628
Score = 104 bits (250), Expect = 6e-23
Identities = 52/114 (45%), Positives = 72/114 (63%), Gaps = 1/114 (0%)
Frame = +1
Query: 424 TLDGIWSFRPSPADP-EFGYRNGWYAQDLEKTGSVIHMPVPSSYNDVGEDASLRDHVGLV 600
+LDG+W+F P + + G N W DLE+ + MPVPS+YND+G + LRDH+G V
Sbjct: 35 SLDGLWTFVREPHNGGDVGIVNQWNTLDLERFQNATVMPVPSAYNDLGTGSELRDHIGWV 94
Query: 601 WYDRRFHVPPWWQTAKQRVWLRFSSVHYAAEVFVNGKSVTYHEIGHLPFEVXIT 762
WY+++ VP + R LRF SV+Y A V++N + VT H GHLPFEV I+
Sbjct: 95 WYEKKEFVP--LRDRNMRHVLRFGSVNYFAVVYINSEKVTSHIGGHLPFEVDIS 146
>Z78540-2|CAB01737.1| 900|Caenorhabditis elegans Hypothetical
protein C33G3.4 protein.
Length = 900
Score = 31.9 bits (69), Expect = 0.52
Identities = 18/55 (32%), Positives = 27/55 (49%)
Frame = +1
Query: 604 YDRRFHVPPWWQTAKQRVWLRFSSVHYAAEVFVNGKSVTYHEIGHLPFEVXITDV 768
Y R+F + T +L SV A V+VNG+ V + LP+ V +TD+
Sbjct: 83 YSRKFRLIDLDDTVG--AFLEIESVDTIATVYVNGQKVLHSRNQFLPYHVNVTDI 135
>AL137227-6|CAB70236.2| 159|Caenorhabditis elegans Hypothetical
protein F58D5.5 protein.
Length = 159
Score = 30.7 bits (66), Expect = 1.2
Identities = 18/50 (36%), Positives = 30/50 (60%), Gaps = 5/50 (10%)
Frame = -3
Query: 646 SPSATTAERG----TSCRTTPSLHG-PEERRLRPRHYMKKAQACVSQSLS 512
SPS+++ G +S +TTP G P +++ +PRH +KAQ+ SL+
Sbjct: 11 SPSSSSRPSGGGGQSSHQTTPKSSGNPRQQQAQPRHRQRKAQSSSPASLA 60
>Z81095-3|CAB03159.2| 494|Caenorhabditis elegans Hypothetical
protein F59F4.3 protein.
Length = 494
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/44 (29%), Positives = 26/44 (59%)
Frame = +3
Query: 261 RFAFALLLICIVSVTLAVVPLSSSSNEINQLYKRKLPSNGGALY 392
RF F +L+ +VS T+ +P++ N+++ + R +P+ A Y
Sbjct: 447 RFVFWAMLLGVVSTTVMFIPMTYVMNDLDLSWCRLMPNTTFAKY 490
>Z83102-4|CAB05467.1| 259|Caenorhabditis elegans Hypothetical
protein C54C8.5 protein.
Length = 259
Score = 29.1 bits (62), Expect = 3.6
Identities = 20/86 (23%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Frame = -1
Query: 306 TSRTLCILAEARKQISALSCLIKLSS-LVRIN*ISILLFESSHPRYLFV--FLTIPNTKK 136
++RT+ ++ K+I+ L +I+L++ L + + ++ E + V L N
Sbjct: 11 SNRTIIVVTPTYKRITRLPDMIRLANTLAHVKNLHWIVVEDGYGIVPAVRELLEKTNLSY 70
Query: 135 KFNAQNKIKQFPTRSWRAYRNNIRYV 58
+ A K +PTR W +RY+
Sbjct: 71 TYMAHKTAKGYPTRGWYQRTMALRYI 96
>U15304-1|AAA50369.1| 407|Caenorhabditis elegans PES-10 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = +2
Query: 92 DLVGNCFILFCA----LNFFLVFGIVKKTNKYRG*LDSNSKI--EIQLILTSEESFIKHD 253
+L +CF + + LN + FGI +K +Y+G ++ KI ++ +L E F++ D
Sbjct: 113 ELTRSCFDIIVSFGLTLNAYDEFGIFRKAMEYQGQMEEADKIISDVDAMLLRNE-FLEED 171
Query: 254 KAE 262
+AE
Sbjct: 172 EAE 174
>AL110485-21|CAB60370.1| 407|Caenorhabditis elegans Hypothetical
protein Y46G5A.27 protein.
Length = 407
Score = 29.1 bits (62), Expect = 3.6
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 6/63 (9%)
Frame = +2
Query: 92 DLVGNCFILFCA----LNFFLVFGIVKKTNKYRG*LDSNSKI--EIQLILTSEESFIKHD 253
+L +CF + + LN + FGI +K +Y+G ++ KI ++ +L E F++ D
Sbjct: 113 ELTRSCFDIIVSFGLTLNAYDEFGIFRKAMEYQGQMEEADKIISDVDAMLLRNE-FLEED 171
Query: 254 KAE 262
+AE
Sbjct: 172 EAE 174
>Z66498-3|CAA91293.2| 687|Caenorhabditis elegans Hypothetical
protein M195.3 protein.
Length = 687
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = -3
Query: 682 NERC*ISARPVVSPSATTAERGTSCRTTPSLH 587
N I A SPS++T+ R S R++PS+H
Sbjct: 602 NSNVSIEASVEKSPSSSTSRRSISIRSSPSIH 633
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,241,811
Number of Sequences: 27780
Number of extensions: 366755
Number of successful extensions: 974
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 951
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 973
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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