Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_P03
(705 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_0632 - 20112297-20116562 36 0.031
05_05_0195 + 23142830-23143714,23144288-23144314,23144657-231448... 35 0.072
11_03_0078 - 9662677-9663642,9666589-9666747 33 0.17
02_02_0279 - 8507603-8507620,8508040-8508060,8508613-8508835,850... 33 0.29
03_03_0280 - 16166962-16167393,16167646-16167770,16168305-161686... 30 1.6
11_06_0610 - 25449085-25453284 30 2.1
07_01_0347 - 2509229-2509487,2509682-2509922,2510292-2510511,251... 29 2.7
06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979 29 2.7
02_04_0233 - 21135743-21135867,21135970-21136340,21136486-211367... 29 2.7
01_07_0205 - 41978437-41980599,41980805-41981215 29 2.7
03_02_0341 - 7643426-7643973,7644340-7644505 29 3.6
12_01_0419 - 3316866-3318172,3318249-3318360 29 4.8
09_04_0180 + 15367737-15367755,15368874-15369739 29 4.8
10_08_1037 - 22477358-22478752 28 6.3
08_01_0746 - 6959210-6959344,6959467-6959776,6960102-6960589 28 6.3
04_04_0639 + 26883810-26883821,26884131-26884307,26885276-268853... 28 6.3
02_04_0595 - 24186714-24186898,24187004-24187150,24187647-241877... 28 6.3
11_01_0061 - 456521-457389,457534-457659,458377-459307,459564-45... 28 8.3
04_03_0747 - 19251617-19251781,19252377-19252502,19252606-192527... 28 8.3
>07_03_0632 - 20112297-20116562
Length = 1421
Score = 35.9 bits (79), Expect = 0.031
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 1/65 (1%)
Frame = -1
Query: 594 HLDI-DCLHMDCYLHRGILLLMNLHRGILRLLNLHRGILHLMNLRRGNLHVRTCRHMVSS 418
HL I DC + ++ L NLH + L GIL L NL+ NLH+ CR ++S+
Sbjct: 1083 HLSINDCSQKLILPCQNLISLENLHLSNCKELYFEGGILRLNNLK--NLHISGCRKIIST 1140
Query: 417 RQKKL 403
++++
Sbjct: 1141 VEEEI 1145
>05_05_0195 + 23142830-23143714,23144288-23144314,23144657-23144866,
23144976-23145242,23146290-23146376,23146495-23146553,
23147166-23147768,23148063-23148192,23148570-23149100,
23149636-23149743,23149911-23150456,23150957-23151079,
23151494-23151709
Length = 1263
Score = 34.7 bits (76), Expect = 0.072
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEV 561
PP E Q+ PP E Q PP E Q ED EV
Sbjct: 1217 PPAETSQLATPPAETSQLATPPAETSQLEDGRTEV 1251
Score = 31.9 bits (69), Expect = 0.51
Identities = 20/53 (37%), Positives = 23/53 (43%)
Frame = +1
Query: 451 EVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDRQED 609
EVPP E PP E Q PP E Q PP E T +E +V +D
Sbjct: 1208 EVPPVEATA---PPAETSQLATPPAETSQLATPPAE-TSQLEDGRTEVQNLDD 1256
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/33 (39%), Positives = 16/33 (48%)
Frame = +1
Query: 448 MEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
+ PP E Q+ PP E Q ED EV +D
Sbjct: 1224 LATPPAETSQLATPPAETSQLEDGRTEVQNLDD 1256
>11_03_0078 - 9662677-9663642,9666589-9666747
Length = 374
Score = 33.5 bits (73), Expect = 0.17
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Frame = +1
Query: 493 MEVQQAEDPPME-VHQEEDPPMEVTIHMEAINIQVDRQEDITPTAAITITGEVRRMAEIX 669
+EV++ DP E VH EE+ P+ +H+E N+ + + ++ + G+V E+
Sbjct: 213 VEVREENDPVREEVHAEENVPLREEVHVED-NVPLREEVNVEENVPVREEGDVEDGREVG 271
Query: 670 LTVETHTTEA 699
VE EA
Sbjct: 272 DDVELPEEEA 281
>02_02_0279 -
8507603-8507620,8508040-8508060,8508613-8508835,
8509204-8509553,8509631-8509729,8509811-8510105,
8510200-8510405,8510498-8510689,8510766-8511163,
8511258-8511444,8511473-8511528,8511800-8511872,
8512012-8512872,8514353-8514778
Length = 1134
Score = 32.7 bits (71), Expect = 0.29
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +1
Query: 493 MEVQQAEDPPME-VHQEEDPPMEVTIHMEAINIQVDRQEDITPTAAITITGEVRRMAEIX 669
+EV++ DP E VH EE+ P+ +H E N+ + + ++ + G+V E+
Sbjct: 302 VEVREENDPVREEVHAEENVPLREEVHAED-NVPLREEVNVEENVPVREEGDVEDGREVG 360
Query: 670 LTVETHTTEA 699
VE EA
Sbjct: 361 DDVELPEEEA 370
>03_03_0280 -
16166962-16167393,16167646-16167770,16168305-16168645,
16171153-16171313
Length = 352
Score = 30.3 bits (65), Expect = 1.6
Identities = 17/53 (32%), Positives = 32/53 (60%), Gaps = 4/53 (7%)
Frame = +1
Query: 466 EVHQVEDPPM--EVQQAEDPPM--EVHQEEDPPMEVTIHMEAINIQVDRQEDI 612
EVH E+ P+ EV + P+ EVH E++ P+ +++E + +V+ +ED+
Sbjct: 234 EVHGEENMPVREEVCVEGNVPLREEVHAEDNVPLREEVNVEEVRERVNGEEDV 286
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.9 bits (64), Expect = 2.1
Identities = 15/34 (44%), Positives = 17/34 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PP E H V PP E ++ PP E H PP E
Sbjct: 841 PPPEAH-VSSPPPE--KSSSPPPEAHVSSPPPPE 871
>07_01_0347 -
2509229-2509487,2509682-2509922,2510292-2510511,
2510943-2511278,2512047-2512103,2512187-2512210
Length = 378
Score = 29.5 bits (63), Expect = 2.7
Identities = 12/54 (22%), Positives = 27/54 (50%)
Frame = +1
Query: 421 THHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAI 582
+ HM M V +V P+E+ A++PP+ +++ ++P + +E +
Sbjct: 53 SRHMNKIFSMSVQQASKSKVAVKPLELDNAKEPPLNLYKPKEPYTATIVSVERL 106
>06_02_0119 + 12040476-12041273,12042767-12042834,12042931-12042979
Length = 304
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/48 (31%), Positives = 19/48 (39%)
Frame = +1
Query: 409 LLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPP 552
LL G HH A PH PP ++PP + P + PP
Sbjct: 44 LLYGQHH--ALPHPPPPPPPPQPAKEPPPPTKPKHPKPKQQQHPPPPP 89
>02_04_0233 -
21135743-21135867,21135970-21136340,21136486-21136757,
21137289-21137397,21137846-21138247,21138376-21138419,
21138539-21138759,21140163-21140274,21140620-21140754
Length = 596
Score = 29.5 bits (63), Expect = 2.7
Identities = 13/38 (34%), Positives = 24/38 (63%)
Frame = +1
Query: 253 HILHARRSPLSKDRMQQNRRNLSQWLQNRKHQLLISTR 366
HIL R + ++ D + + + LS+WLQ++ LIS++
Sbjct: 308 HILPCRPTGVTLDIKKSSHKKLSKWLQSKSSAGLISSK 345
>01_07_0205 - 41978437-41980599,41980805-41981215
Length = 857
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/55 (27%), Positives = 27/55 (49%)
Frame = +1
Query: 292 RMQQNRRNLSQWLQNRKHQLLISTRPLTTNPRFRPATEFLLAGTHHMTARPHMEV 456
R Q ++ N ++W R H L+ T L +N F ++ G+ H+ + HM +
Sbjct: 431 RAQPSQSNRTKW---RMHDLVHDTAVLISNVEFTTVLSSVMFGSPHVQSLHHMSI 482
>03_02_0341 - 7643426-7643973,7644340-7644505
Length = 237
Score = 29.1 bits (62), Expect = 3.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +1
Query: 424 HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIH 570
HH+ P + VPP H PP+ +PP+ V + P+ V H
Sbjct: 165 HHIVLHPPVIVPPKHDHDHSLPPV-----HEPPVTVPDHKPAPVTVPDH 208
>12_01_0419 - 3316866-3318172,3318249-3318360
Length = 472
Score = 28.7 bits (61), Expect = 4.8
Identities = 24/66 (36%), Positives = 28/66 (42%), Gaps = 5/66 (7%)
Frame = +1
Query: 442 PHMEVPPTEVHQVEDPPMEVQQAEDPPM-EVHQE---EDPPME-VTIHMEAINIQVDRQE 606
P E P E +P E AE+PP E QE E PP+E T E +Q
Sbjct: 323 PVQEPPAEETPTATEPEPEPPAAEEPPAAEPEQEPQPETPPVESETPAEEQAPVQEPPAA 382
Query: 607 DITPTA 624
D TP A
Sbjct: 383 DETPAA 388
>09_04_0180 + 15367737-15367755,15368874-15369739
Length = 294
Score = 28.7 bits (61), Expect = 4.8
Identities = 16/38 (42%), Positives = 22/38 (57%)
Frame = +1
Query: 466 EVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEA 579
E+ VED +E+ AEDP +E + DP EV +EA
Sbjct: 35 ELEPVEDDVLEL--AEDPALEPLPDLDPEPEVEAELEA 70
>10_08_1037 - 22477358-22478752
Length = 464
Score = 28.3 bits (60), Expect = 6.3
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
Frame = +1
Query: 442 PHMEVPPTEVHQVEDPP-MEVQQAEDPPMEVHQEEDPPM 555
PH +PP HQ PP M +Q+ PP+ PP+
Sbjct: 251 PHRPLPPQ--HQQPKPPSMRLQKIRPPPISTPVARPPPV 287
>08_01_0746 - 6959210-6959344,6959467-6959776,6960102-6960589
Length = 310
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -1
Query: 450 HVRTCRHMVSSRQKKLRCWAEPG 382
HV T R V R CW+EPG
Sbjct: 262 HVETERRQVFGRDPYFACWSEPG 284
>04_04_0639 +
26883810-26883821,26884131-26884307,26885276-26885339,
26886614-26887734,26888193-26888481,26888528-26888658,
26888910-26889133,26889220-26889286,26889744-26889803,
26889896-26889979,26890290-26890301
Length = 746
Score = 28.3 bits (60), Expect = 6.3
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = +1
Query: 442 PHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQ-EEDP-PMEVT 564
P+ + PP Q PP QQ P + + E +P PMEVT
Sbjct: 355 PNNDAPPRPPAQSTPPPPPQQQQHQPETKAREPEPEPEPMEVT 397
>02_04_0595 -
24186714-24186898,24187004-24187150,24187647-24187718,
24188061-24188204,24188769-24188840,24189233-24189304,
24189805-24189876,24190214-24190285,24190416-24190487,
24190685-24190756,24190957-24191031,24191226-24191372,
24191670-24191877,24192240-24192368,24192454-24192663
Length = 582
Score = 28.3 bits (60), Expect = 6.3
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Frame = -1
Query: 537 LMNL-HRGILRLLNLHRGILHLMNLRR-GNLHVRTCRHMVSSRQKKL 403
L+NL + + R L +H G++HL LR +L++R C ++ S K L
Sbjct: 209 LVNLVNLDLERCLKIHGGLVHLKGLRNLESLNMRYCNNIADSDIKYL 255
>11_01_0061 -
456521-457389,457534-457659,458377-459307,459564-459581,
459924-460183,461834-461918,462587-462919,463053-463137,
463289-463374,463455-463556,463656-463795,464332-464658,
464778-465389,465502-465586,465587-465682,465762-466115,
466212-466322,466426-466509,467086-467164,467742-467899,
468034-468150,468240-468398,468475-468557,469098-469200,
470784-471080
Length = 1899
Score = 27.9 bits (59), Expect = 8.3
Identities = 13/48 (27%), Positives = 22/48 (45%)
Frame = +1
Query: 409 LLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPP 552
L+ + +A P +P + + D + V+ DP +V EE PP
Sbjct: 5 LVHSSSSSSAAPSAALPNHHTNHLVDDHLPVENGPDPRRDVPDEEPPP 52
>04_03_0747 -
19251617-19251781,19252377-19252502,19252606-19252716,
19252931-19253679,19254034-19254167,19254595-19254740,
19255166-19255336,19255977-19256828
Length = 817
Score = 27.9 bits (59), Expect = 8.3
Identities = 10/31 (32%), Positives = 18/31 (58%)
Frame = +1
Query: 517 PPMEVHQEEDPPMEVTIHMEAINIQVDRQED 609
PP+E+ EE+ EV + E + + D +E+
Sbjct: 73 PPIEISDEEEAEAEVVVEEEEVVVVEDEEEE 103
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,210,935
Number of Sequences: 37544
Number of extensions: 381392
Number of successful extensions: 1405
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1251
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1384
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1815633512
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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