Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_P03
(705 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066) 38 0.006
SB_51223| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.018
SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66) 36 0.024
SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032) 31 0.69
SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.69
SB_50752| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-12) 31 0.91
SB_18441| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-12) 31 0.91
SB_52812| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.91
SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 31 0.91
SB_34673| Best HMM Match : UK (HMM E-Value=0.6) 31 1.2
SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_43456| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_18764| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0) 29 2.8
SB_8818| Best HMM Match : I-set (HMM E-Value=0) 29 2.8
SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75) 29 3.7
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 29 4.9
SB_52813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36) 29 4.9
SB_29786| Best HMM Match : I-set (HMM E-Value=0) 29 4.9
SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062) 29 4.9
SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.9
SB_58611| Best HMM Match : Collagen (HMM E-Value=0.4) 28 6.4
SB_25017| Best HMM Match : VirB (HMM E-Value=1.3) 28 6.4
SB_208| Best HMM Match : zf-C2H2 (HMM E-Value=1.7) 28 6.4
SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3) 28 8.5
SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.5
>SB_9594| Best HMM Match : Extensin_2 (HMM E-Value=0.066)
Length = 361
Score = 38.3 bits (85), Expect = 0.006
Identities = 22/65 (33%), Positives = 25/65 (38%)
Frame = +1
Query: 367 PLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
P T +P P + T RP PPT VH PP V+ PP VH
Sbjct: 28 PNTVHPCHSPPNTVRPCHSPPNTVRP-CHSPPTAVHPCHSPPTAVRPCHSPPTAVHPCHS 86
Query: 547 PPMEV 561
PP V
Sbjct: 87 PPNTV 91
Score = 34.3 bits (75), Expect = 0.098
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +1
Query: 367 PLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
P T P P T F + T RP PP V PP V+ PP V
Sbjct: 278 PNTVRPCHSPPTAFRPCHSPPNTVRP-CHSPPNTVRPCHSPPTAVRPCHSPPTAVRPCHS 336
Query: 547 PPMEV 561
PP V
Sbjct: 337 PPNTV 341
Score = 33.9 bits (74), Expect = 0.13
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = +1
Query: 367 PLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
P T P P T + RP PPT VH PP V+ P VH
Sbjct: 48 PNTVRPCHSPPTAVHPCHSPPTAVRP-CHSPPTAVHPCHSPPNTVRPCHSPLTAVHPCHS 106
Query: 547 PPMEV 561
PP V
Sbjct: 107 PPTAV 111
Score = 32.7 bits (71), Expect = 0.30
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = +1
Query: 430 MTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEV 561
+TA PPT VH PP V+ PP V PP V
Sbjct: 98 LTAVHPCHSPPTAVHPCHSPPNTVRPCHSPPTAVRPCHSPPTAV 141
Score = 32.3 bits (70), Expect = 0.39
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = +1
Query: 433 TARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEV 561
T RP PPT VH PP V PP V PP V
Sbjct: 10 TVRP-CHSPPTAVHPCHSPPNTVHPCHSPPNTVRPCHSPPNTV 51
Score = 31.5 bits (68), Expect = 0.69
Identities = 22/66 (33%), Positives = 25/66 (37%), Gaps = 1/66 (1%)
Frame = +1
Query: 367 PLTT-NPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEE 543
PLT +P P T + T RP PPT V PP V+ PP V
Sbjct: 97 PLTAVHPCHSPPTAVHPCHSPPNTVRP-CHSPPTAVRPCHSPPTAVRPCHSPPNTVRPCH 155
Query: 544 DPPMEV 561
PP V
Sbjct: 156 SPPNTV 161
Score = 31.5 bits (68), Expect = 0.69
Identities = 20/65 (30%), Positives = 22/65 (33%)
Frame = +1
Query: 367 PLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
P +P P T + T RP PP VH PP V PP V
Sbjct: 218 PTAVHPCHSPLTAVRPCHSPPNTVRP-CHSPPNTVHPCHSPPNTVHPCFSPPNTVRPCHS 276
Query: 547 PPMEV 561
PP V
Sbjct: 277 PPNTV 281
Score = 29.9 bits (64), Expect = 2.1
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEV 561
PP VH PP V+ PP V PP V
Sbjct: 27 PPNTVHPCHSPPNTVRPCHSPPNTVRPCHSPPTAV 61
Score = 29.9 bits (64), Expect = 2.1
Identities = 20/65 (30%), Positives = 21/65 (32%)
Frame = +1
Query: 367 PLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
P T P P T + RP PP V PP V PP VH
Sbjct: 208 PNTVRPCHSPPTAVHPCHSPLTAVRP-CHSPPNTVRPCHSPPNTVHPCHSPPNTVHPCFS 266
Query: 547 PPMEV 561
PP V
Sbjct: 267 PPNTV 271
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/35 (37%), Positives = 13/35 (37%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEV 561
PP V PP V PP VH PP V
Sbjct: 7 PPNTVRPCHSPPTAVHPCHSPPNTVHPCHSPPNTV 41
Score = 29.5 bits (63), Expect = 2.8
Identities = 18/61 (29%), Positives = 20/61 (32%)
Frame = +1
Query: 367 PLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
P P P T + T RP PP V PP V+ PP VH
Sbjct: 128 PTAVRPCHSPPTAVRPCHSPPNTVRP-CHSPPNTVRPCHSPPNTVRPCHSPPNTVHPCHS 186
Query: 547 P 549
P
Sbjct: 187 P 187
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/65 (29%), Positives = 21/65 (32%)
Frame = +1
Query: 367 PLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
P T P P T + RP PP V PP V+ PP V
Sbjct: 118 PNTVRPCHSPPTAVRPCHSPPTAVRP-CHSPPNTVRPCHSPPNTVRPCHSPPNTVRPCHS 176
Query: 547 PPMEV 561
PP V
Sbjct: 177 PPNTV 181
Score = 29.1 bits (62), Expect = 3.7
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = +1
Query: 433 TARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVH 534
T RP PPT V PP V+ PP VH
Sbjct: 310 TVRP-CHSPPTAVRPCHSPPTAVRPCHSPPNTVH 342
Score = 27.9 bits (59), Expect = 8.5
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPP 552
PP VH PP V+ PP V PP
Sbjct: 257 PPNTVHPCFSPPNTVRPCHSPPNTVRPCHSPP 288
>SB_51223| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 219
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PPT+ H DPP + DPP + H DPP +
Sbjct: 96 PPTDRHGPSDPPTDRHGPSDPPTDRHGPSDPPTD 129
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PPT+ H DPP + DPP + H DPP +
Sbjct: 106 PPTDRHGPSDPPTDRHGPSDPPTDRHGPSDPPTD 139
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PPT+ H DPP + DPP + H DPP +
Sbjct: 116 PPTDRHGPSDPPTDRHGPSDPPTDRHGPSDPPAD 149
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PPT+ H DPP + DPP + H DPP +
Sbjct: 126 PPTDRHGPSDPPTDRHGPSDPPADRHGPSDPPAD 159
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PPT+ H DPP + DPP + H DPP +
Sbjct: 136 PPTDRHGPSDPPADRHGPSDPPADRHGPSDPPTD 169
Score = 36.7 bits (81), Expect = 0.018
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PPT+ H DPP + DPP + H DPP +
Sbjct: 166 PPTDRHGPSDPPADRHGPSDPPADRHGPSDPPAD 199
Score = 34.7 bits (76), Expect = 0.074
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PP + H DPP + DPP + H DPP +
Sbjct: 46 PPADRHGPSDPPTDRHGPSDPPTDRHGPSDPPTD 79
Score = 34.7 bits (76), Expect = 0.074
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PP + H DPP + DPP + H DPP +
Sbjct: 146 PPADRHGPSDPPADRHGPSDPPTDRHGPSDPPAD 179
Score = 34.7 bits (76), Expect = 0.074
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PP + H DPP + DPP + H DPP +
Sbjct: 156 PPADRHGPSDPPTDRHGPSDPPADRHGPSDPPAD 189
Score = 34.7 bits (76), Expect = 0.074
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PP + H DPP + DPP + H DPP +
Sbjct: 176 PPADRHGPSDPPADRHGPSDPPADRHGPSDPPAD 209
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/31 (41%), Positives = 16/31 (51%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDP 549
PPT+ H DPP + DPP + H DP
Sbjct: 56 PPTDRHGPSDPPTDRHGPSDPPTDRHGPSDP 86
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PPT+ H DPP + DP + H DPP +
Sbjct: 66 PPTDRHGPSDPPTDRHGPSDPSADRHGPSDPPTD 99
Score = 33.5 bits (73), Expect = 0.17
Identities = 13/34 (38%), Positives = 17/34 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
PPT+ H DP + DPP + H DPP +
Sbjct: 76 PPTDRHGPSDPSADRHGPSDPPTDRHGPSDPPTD 109
Score = 31.5 bits (68), Expect = 0.69
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
P + H DPP + DPP + H DPP +
Sbjct: 86 PSADRHGPSDPPTDRHGPSDPPTDRHGPSDPPTD 119
>SB_53385| Best HMM Match : DUF1388 (HMM E-Value=0.66)
Length = 264
Score = 36.3 bits (80), Expect = 0.024
Identities = 32/106 (30%), Positives = 48/106 (45%), Gaps = 6/106 (5%)
Frame = +1
Query: 277 PLSKDRMQQNRRNLSQWLQNRKHQLLISTRPLT-TNPR--FRPATEFLLAGTHHMTARPH 447
PL R Q++ R L +H+ L S RPL T P+ RP E H PH
Sbjct: 146 PLEPTRPQESHRPLEPPRPQEQHRPLESHRPLEPTRPQESHRPL-EPPRPQEPHRPQEPH 204
Query: 448 --MEVP-PTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHME 576
+E P P E H+ ++PP ++ P E H+ ++P + H +
Sbjct: 205 RPLEPPRPQEQHRPQEPPKTLEPHR--PQEPHRPQEPRRPLEPHRQ 248
>SB_24886| Best HMM Match : Extensin_2 (HMM E-Value=0.0032)
Length = 807
Score = 31.5 bits (68), Expect = 0.69
Identities = 17/56 (30%), Positives = 25/56 (44%)
Frame = +1
Query: 451 EVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDRQEDITP 618
E+P ++H P+E+ P+E+H P+E IH I Q ITP
Sbjct: 26 ELPHLKIHSPGITPLEIHSPGITPLEIHSPGITPLE--IHSPGITPQEIHSPGITP 79
>SB_32489| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1240
Score = 31.5 bits (68), Expect = 0.69
Identities = 10/36 (27%), Positives = 19/36 (52%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
PP++ + PP + +A PP + + PP++ T
Sbjct: 804 PPSQTTEAYTPPAQTTEANTPPAQTTEANTPPVQTT 839
Score = 30.3 bits (65), Expect = 1.6
Identities = 10/36 (27%), Positives = 18/36 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
PP + + PP + +A PP++ + + P E T
Sbjct: 814 PPAQTTEANTPPAQTTEANTPPVQTTESYNTPTETT 849
>SB_50752| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-12)
Length = 381
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 516 ILRLLNLHRGILHLMNLRRGNLHVRTCRHMVSSRQKKLRC 397
+ R+L HRG + +LH T H ++RQK+ C
Sbjct: 253 VFRVLQFHRGRIQCQEQISKSLHSETVNHFNTARQKRKSC 292
>SB_18441| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-12)
Length = 381
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/40 (32%), Positives = 20/40 (50%)
Frame = -1
Query: 516 ILRLLNLHRGILHLMNLRRGNLHVRTCRHMVSSRQKKLRC 397
+ R+L HRG + +LH T H ++RQK+ C
Sbjct: 253 VFRVLQFHRGRIQCQEQISKSLHSETVNHFNTARQKRKSC 292
>SB_52812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 114
Score = 31.1 bits (67), Expect = 0.91
Identities = 19/58 (32%), Positives = 28/58 (48%)
Frame = +1
Query: 445 HMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDRQEDITP 618
H EV P + E P+E +E P+E E P++ T H E I+ R D++P
Sbjct: 48 HSEVSPIKTTPSEVSPIETTPSEVSPIETTPSEVSPIKTT-HSEVSPIKTTR-TDVSP 103
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +1
Query: 445 HMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
H EV P E E P+E +E P++ E P+E T
Sbjct: 28 HSEVSPIETTPSEVSPIETTHSEVSPIKTTPSEVSPIETT 67
>SB_48086| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1353
Score = 31.1 bits (67), Expect = 0.91
Identities = 13/53 (24%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Frame = +1
Query: 427 HMTARPHMEVPPT---EVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHME 576
H+ HME+PP+ + H PP+ +++ + P +H +E + ++H++
Sbjct: 746 HLKEHEHMELPPSLHLKEHVELPPPLHLREHVELPPSLHLKEHVELPPSLHLK 798
Score = 29.1 bits (62), Expect = 3.7
Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 7/53 (13%)
Frame = +1
Query: 439 RPHMEVPPT---EVHQVEDPPMEVQQAED--PPMEV--HQEEDPPMEVTIHME 576
+ H+E+PP + H PP+ +++ D PP+ + H E PP+ + H+E
Sbjct: 956 KEHVELPPPLHLKEHMELPPPLHLKEHVDLPPPLHLKEHVELPPPLHLKEHVE 1008
>SB_21044| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 1507
Score = 31.1 bits (67), Expect = 0.91
Identities = 26/88 (29%), Positives = 33/88 (37%), Gaps = 5/88 (5%)
Frame = -1
Query: 627 CRRRGYVLLTIHLDIDCLHMDCYLHRGILLLMNLHRGILRLLNLHRGILHLMNLRRGNLH 448
C V LT + D + + C RG+ L N G+ LN RG+ RG H
Sbjct: 1070 CNTSRGVTLTRNTSRD-VALTCNTSRGVTLTRNTSHGVTLTLNTSRGVTLSSKTSRGVSH 1128
Query: 447 VRTCRHMVS-----SRQKKLRCWAEPGV 379
R +S SR L C GV
Sbjct: 1129 TRNTSRGLSLTYNTSRSVTLTCNTSRGV 1156
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/62 (29%), Positives = 24/62 (38%)
Frame = -1
Query: 570 MDCYLHRGILLLMNLHRGILRLLNLHRGILHLMNLRRGNLHVRTCRHMVSSRQKKLRCWA 391
+ C RG++L N G+ N RG+ N RG R +SR L C
Sbjct: 1293 LSCKTSRGVILARNTSSGVTLTRNTSRGVTLTCNTSRGVTLTRN-----TSRSVTLTCNT 1347
Query: 390 EP 385
P
Sbjct: 1348 SP 1349
>SB_34673| Best HMM Match : UK (HMM E-Value=0.6)
Length = 641
Score = 30.7 bits (66), Expect = 1.2
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Frame = +1
Query: 382 PRFRPATEFLLAGTHHMTARPHMEV-----PPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
PR + T A +H R +++ P EV D P EV D P E D
Sbjct: 24 PRIQWRTPCECASSHESICRHNLQTIDKPDRPQEVTYTPDRPQEVTNTPDRPQEETNRLD 83
Query: 547 PPMEVT 564
P E+T
Sbjct: 84 RPQEIT 89
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +1
Query: 460 PTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
P E+ V + P E + D P E E D P E T
Sbjct: 85 PQEITDVPERPQEAKDEPDRPQEATHEPDRPEETT 119
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = +1
Query: 460 PTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPME 558
P E V D P EV D P E + D P E
Sbjct: 115 PEETTDVPDRPQEVTTTPDRPQEANDAPDRPQE 147
Score = 27.9 bits (59), Expect = 8.5
Identities = 20/68 (29%), Positives = 26/68 (38%)
Frame = +1
Query: 460 PTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDRQEDITPTAAITIT 639
P E + D P E A + EV D P EVT + + ++ED P T
Sbjct: 135 PQEANDAPDRPQETNDAPERSHEVTNTPDKPQEVTDSPDRL-----QEEDDAPDRPQEAT 189
Query: 640 GEVRRMAE 663
E R E
Sbjct: 190 DESDRSQE 197
>SB_33342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1189
Score = 30.3 bits (65), Expect = 1.6
Identities = 18/74 (24%), Positives = 34/74 (45%)
Frame = +1
Query: 343 HQLLISTRPLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPP 522
+ L+ S P+T+ P + +F +G+ + P + PP + ++ QQ PP
Sbjct: 1103 YSLVGSKYPMTSTPMRHNSAQFPRSGSLDNSTEPLISSPPQRSQSYD---LDHQQPIRPP 1159
Query: 523 MEVHQEEDPPMEVT 564
+ Q+ P +VT
Sbjct: 1160 IPTFQDNGPHYKVT 1173
>SB_29636| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 306
Score = 30.3 bits (65), Expect = 1.6
Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 4/47 (8%)
Frame = +1
Query: 451 EVPPTEVHQVEDPPMEVQ--QAEDPPME--VHQEEDPPMEVTIHMEA 579
E P E +VED P EV+ + E+ P E +EED P E T EA
Sbjct: 234 ETPKEETPKVEDAPEEVEAPKEEESPKEEDTPKEEDAPKEDTPKEEA 280
>SB_43456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 29.5 bits (63), Expect = 2.8
Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = -1
Query: 549 GILLLMNLH-RGILRLLNLHRGILHLMNLRRGNLHVRTCRHMVSSRQKKLRCW 394
G++ L +L+ R +LR H G +H+ + NLH+ + +S K + CW
Sbjct: 103 GLIQLFDLNSRAVLRQFKGHSGPVHVTKFLQDNLHI-----VSASDDKLVNCW 150
>SB_18764| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 284
Score = 29.5 bits (63), Expect = 2.8
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = -1
Query: 561 YLHRGILLLMNLHRGILRLLNLHRGILHLMNL 466
Y+ R + MNLH IL ++NLH I ++NL
Sbjct: 249 YVSRHVKQTMNLHCKILPVINLHCKIYKIINL 280
>SB_35194| Best HMM Match : EGF_2 (HMM E-Value=0)
Length = 960
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/28 (46%), Positives = 14/28 (50%)
Frame = -3
Query: 358 KSTVGVCGFGAIGLGCAGSAACDPSTRD 275
KS C G G+ CA S CDPS D
Sbjct: 720 KSCKDPCPAGRYGMMCASSCRCDPSKTD 747
>SB_8818| Best HMM Match : I-set (HMM E-Value=0)
Length = 2787
Score = 29.5 bits (63), Expect = 2.8
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Frame = +1
Query: 397 ATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDP----PMEV- 561
AT LL + E P E +VE+P +E + E+P + E P P EV
Sbjct: 1006 ATTELLVNEKPVEEEKQPEKPKVEKPEVEEPEVEKPEVEEPVSGKPEVETPVGEVPQEVL 1065
Query: 562 -TIHMEAINIQVDRQEDITPT 621
+ +E + ED+ PT
Sbjct: 1066 APVTVEVVETAPITLEDMKPT 1086
>SB_14043| Best HMM Match : Extensin_1 (HMM E-Value=0.75)
Length = 568
Score = 29.1 bits (62), Expect = 3.7
Identities = 19/56 (33%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +1
Query: 358 STRPLTTNPRF-RPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPP 522
+T+P TT PR +P T T T +PH PPT Q P + PP
Sbjct: 113 TTKPRTTKPRTTKPHT------TKPCTTKPHTTKPPTTKPQTTKPHTTKPRTTKPP 162
Score = 28.3 bits (60), Expect = 6.4
Identities = 18/67 (26%), Positives = 22/67 (32%)
Frame = +1
Query: 352 LISTRPLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEV 531
L +T+P TT P T T +PH P T PP Q P
Sbjct: 96 LYTTKPKTTKPHTNKPYTTKPRTTKPRTTKPHTTKPCTTKPHTTKPPTTKPQTTKPHTTK 155
Query: 532 HQEEDPP 552
+ PP
Sbjct: 156 PRTTKPP 162
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/82 (20%), Positives = 34/82 (41%)
Frame = +1
Query: 367 PLTTNPRFRPATEFLLAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEED 546
P+ P+ + E + P E P E + E+P E + E+P E ++E+
Sbjct: 20 PIEEGPKQKELVEEEPKQEEQVEEEPKQEEPVEEEPKQEEPVKEEPKQEEPVEEEPKQEE 79
Query: 547 PPMEVTIHMEAINIQVDRQEDI 612
P + E + + ++E +
Sbjct: 80 PVEQKPKQEEPVEEEPKQEEPV 101
>SB_52813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 283
Score = 28.7 bits (61), Expect = 4.9
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 4/65 (6%)
Frame = +1
Query: 451 EVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDRQE----DITP 618
+V P + + P+E +E P+E E P++ T H E I+ R + + TP
Sbjct: 219 DVLPIKTTHTDVSPIETTPSEVSPIETTPSEVSPIKTT-HSEVSPIKTTRTDVSPIETTP 277
Query: 619 TAAIT 633
T IT
Sbjct: 278 TGGIT 282
>SB_41435| Best HMM Match : Cu2_monoox_C (HMM E-Value=4e-36)
Length = 821
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
PP V + PP V + PP V E+ PP +VT
Sbjct: 313 PPGRVTNKKRPPGRVTNEKRPPGRVTNEKRPPGKVT 348
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
PP +V + PP V + PP + E+ PP VT
Sbjct: 343 PPGKVTNQKCPPSRVTNKKRPPGRITNEKRPPGRVT 378
Score = 28.7 bits (61), Expect = 4.9
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
PP V + PP V + PP V E+ PP +VT
Sbjct: 413 PPGRVTNKKRPPGRVTNQKRPPGRVTNEKRPPGKVT 448
Score = 28.3 bits (60), Expect = 6.4
Identities = 14/36 (38%), Positives = 17/36 (47%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
PP V + PP V + PP V E+ PP VT
Sbjct: 303 PPGRVTNQKRPPGRVTNKKRPPGRVTNEKRPPGRVT 338
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/40 (30%), Positives = 20/40 (50%)
Frame = +1
Query: 445 HMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
+ + PP+ V + PP + + PP V ++ PP VT
Sbjct: 349 NQKCPPSRVTNKKRPPGRITNEKRPPGRVTNQKRPPGRVT 388
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
PP V + PP V + PP +V ++ PP VT
Sbjct: 323 PPGRVTNEKRPPGRVTNEKRPPGKVTNQKCPPSRVT 358
Score = 27.9 bits (59), Expect = 8.5
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
PP V + PP V + PP +V ++ PP VT
Sbjct: 423 PPGRVTNQKRPPGRVTNEKRPPGKVTNQKCPPSRVT 458
>SB_29786| Best HMM Match : I-set (HMM E-Value=0)
Length = 6300
Score = 28.7 bits (61), Expect = 4.9
Identities = 32/108 (29%), Positives = 41/108 (37%), Gaps = 6/108 (5%)
Frame = -1
Query: 699 RLRSVSFHRKXNFRHTTNFP-RNCYCRRRGYVLLTIHLDI-DCLHMDCYLHRGILLLMNL 526
RLR S H N RH T N CR Y D D DC LH I++
Sbjct: 142 RLRQASTHADINNRHATKIDGDNDSCRGSDYDNDVNESDNGDYRSGDCSLHSFIIIFQAA 201
Query: 525 HRGILRLLN-LHRGILHLMNL---RRGNLHVRTCRHMVSSRQKKLRCW 394
I R+L LH HL +L R+ L + + +K+ W
Sbjct: 202 CYSIERILEALHLRRRHLDDLWKARKKTLEQCIKKCKIEEEARKISKW 249
>SB_40630| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2174
Score = 28.7 bits (61), Expect = 4.9
Identities = 17/58 (29%), Positives = 27/58 (46%)
Frame = +1
Query: 427 HMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDR 600
H T+ + P E Q+E E+Q+ ED + E+ + +EA N QVD+
Sbjct: 693 HDTSPVTDALSPMETSQIEAVADELQEEEDEDDHIDAVEEESPDAPEEIEASNEQVDQ 750
>SB_36275| Best HMM Match : Extensin_2 (HMM E-Value=0.062)
Length = 406
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +1
Query: 433 TARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPP 552
T PH +PPT PP PP PP
Sbjct: 246 TPTPHTSIPPTPTPHTSIPPTPTPHTSIPPTPTPHTSIPP 285
Score = 28.7 bits (61), Expect = 4.9
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +1
Query: 433 TARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPP 552
T PH +PPT PP PP PP
Sbjct: 256 TPTPHTSIPPTPTPHTSIPPTPTPHTSIPPTPTPHTSIPP 295
>SB_5620| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 937
Score = 28.7 bits (61), Expect = 4.9
Identities = 13/29 (44%), Positives = 17/29 (58%)
Frame = -1
Query: 276 TSSCM*DMCRSCLCDQTCTDLRQARRLRC 190
T SCM D+CR CL D + +R +RC
Sbjct: 33 TLSCMHDLCRKCLEDMAARE--SSRVIRC 59
>SB_58611| Best HMM Match : Collagen (HMM E-Value=0.4)
Length = 773
Score = 28.3 bits (60), Expect = 6.4
Identities = 24/98 (24%), Positives = 34/98 (34%)
Frame = +1
Query: 412 LAGTHHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQ 591
LA +TA+ HQ + + +A P + H E D P IH+ AI +
Sbjct: 638 LATLQALTAKAQEHQATEAAHQETEQRATLLKAPAPEAQGHNEGDRPGARRIHLSAIRLD 697
Query: 592 VDRQEDITPTAAITITGEVRRMAEIXLTVETHTTEAEI 705
Q P + T E R H E E+
Sbjct: 698 DLPQRAPHPPLPRSCTRERRARDRRGTPTYGHFLEREV 735
>SB_25017| Best HMM Match : VirB (HMM E-Value=1.3)
Length = 136
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/31 (41%), Positives = 14/31 (45%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDP 549
PP V + DPP Q DPP V DP
Sbjct: 86 PPDVVQGLSDPPETEQGLSDPPEPVQGLSDP 116
Score = 27.9 bits (59), Expect = 8.5
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +1
Query: 457 PPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEV 561
PP V + PP VQ DPP DPP V
Sbjct: 76 PPDVVQGLRGPPDVVQGLSDPPETEQGLSDPPEPV 110
>SB_208| Best HMM Match : zf-C2H2 (HMM E-Value=1.7)
Length = 836
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 484 DPPMEVQQAEDPPMEVHQEEDPPM 555
DPPM DPPM E DPP+
Sbjct: 393 DPPMWTAPEPDPPMWTTPELDPPV 416
>SB_51168| Best HMM Match : Extensin_2 (HMM E-Value=1.3)
Length = 288
Score = 27.9 bits (59), Expect = 8.5
Identities = 18/61 (29%), Positives = 27/61 (44%)
Frame = +1
Query: 445 HMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDRQEDITPTA 624
H PT +DPP++ +A PP E +PP++ A + + RQ I P
Sbjct: 58 HQSRIPTWTAPQQDPPVDSARARSPPWTA-PEPNPPVD---SARARSFRGQRQSKIPPWT 113
Query: 625 A 627
A
Sbjct: 114 A 114
>SB_49453| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1117
Score = 27.9 bits (59), Expect = 8.5
Identities = 19/78 (24%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +1
Query: 391 RPATEFLLAG--THHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVT 564
RPA ++ G T + PH+ T+ + + +V+Q +PP + P+ T
Sbjct: 470 RPAKRKVIVGDNTVYNYGAPHVTSTSTKAQRRNEHFCQVRQVFEPPNDTTSSPTRPIPST 529
Query: 565 IHMEAINIQVDRQEDITP 618
+ N+ +D E I+P
Sbjct: 530 GRLYFTNVSLD-PETISP 546
>SB_32451| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 924
Score = 27.9 bits (59), Expect = 8.5
Identities = 11/43 (25%), Positives = 21/43 (48%)
Frame = +1
Query: 502 QQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDRQEDITPTAAI 630
Q ++D M + ++PP + + E I+ + D TP A+
Sbjct: 64 QDSQDESMTAEETDEPPNDEEMSQEKAPIEESSKNDETPAVAV 106
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,631,299
Number of Sequences: 59808
Number of extensions: 438553
Number of successful extensions: 2036
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 1468
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1955
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1853669818
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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