Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_P03
         (705 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.0  
AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.     25   1.8  
AY344840-1|AAR05811.1|  221|Anopheles gambiae TEP4 protein.            24   4.1  
AY344839-1|AAR05810.1|  221|Anopheles gambiae TEP4 protein.            24   4.1  
AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein hom...    24   4.1  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   5.4  
AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    23   7.1  
AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            23   9.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   9.4  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    23   9.4  

>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
            growth factor receptorprotein.
          Length = 1433

 Score = 26.2 bits (55), Expect = 1.0
 Identities = 14/62 (22%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
 Frame = +1

Query: 439  RPHMEVP-PTEVHQVEDPPMEVQQAEDPPMEVHQEEDPPMEVTIHMEAINIQVDRQEDIT 615
            RP + +P P+ V   ++ P  ++  +DP     + +    EV +    +N+ +D  + + 
Sbjct: 1163 RPSIMLPGPSAVEPSDEMPKSLRYCKDPLKPDDETDGHGKEVGVGGIRLNLPLDEDDYLM 1222

Query: 616  PT 621
            PT
Sbjct: 1223 PT 1224


>AJ130949-1|CAA10258.1|  401|Anopheles gambiae SG1 protein protein.
          Length = 401

 Score = 25.4 bits (53), Expect = 1.8
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 256 ILHARRSPLSKDRMQQNRRNLSQWLQNRKH 345
           +L+  R PL+K R++  R  L Q  Q  KH
Sbjct: 310 LLYPNRLPLAKQRLEAFRMMLLQINQRNKH 339


>AY344840-1|AAR05811.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 80  SQDKYGLEDCCSSFRHNILRRWILK 154
           S  K GL +   SFR N L  W+ K
Sbjct: 105 SSSKNGLSNSQVSFRTNFLESWLWK 129


>AY344839-1|AAR05810.1|  221|Anopheles gambiae TEP4 protein.
          Length = 221

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +2

Query: 80  SQDKYGLEDCCSSFRHNILRRWILK 154
           S  K GL +   SFR N L  W+ K
Sbjct: 105 SSSKNGLSNSQVSFRTNFLESWLWK 129


>AF119382-1|AAD27585.1|  394|Anopheles gambiae caudal protein
           homolog protein.
          Length = 394

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 9/33 (27%), Positives = 14/33 (42%)
 Frame = +1

Query: 424 HHMTARPHMEVPPTEVHQVEDPPMEVQQAEDPP 522
           HH     H+ VP ++ HQ+    +    A   P
Sbjct: 355 HHAALHAHLGVPTSQHHQLNQAAVAAAAASQVP 387


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 23.8 bits (49), Expect = 5.4
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 421 THHMTARPHMEVPPTEVHQVEDPPMEVQQAEDP 519
           ++H+   P+  +PP     +  PP + QQ + P
Sbjct: 103 SNHLLGGPNHHLPPGASPGLVPPPQQQQQQQAP 135


>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 23.4 bits (48), Expect = 7.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +1

Query: 262 HARRSPLSKDRMQQNRRNLSQWLQN 336
           H +RS   KD  QQN  +  +++QN
Sbjct: 847 HHKRSKRVKDGKQQNHVSFPEFVQN 871


>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 12/51 (23%), Positives = 25/51 (49%)
 Frame = +1

Query: 553  MEVTIHMEAINIQVDRQEDITPTAAITITGEVRRMAEIXLTVETHTTEAEI 705
            + V++ +E + +Q    ED+   A   +T  + R AEI    E + +  ++
Sbjct: 1641 LRVSVWLEGVVVQETLLEDVKSDAERKLTLHLSRTAEITEFFEMYDSTLKV 1691


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/36 (27%), Positives = 18/36 (50%)
 Frame = +1

Query: 205 CLPKIRARLVTQATAAHILHARRSPLSKDRMQQNRR 312
           CLP    R ++ + +A  L  R  P+    +QQ ++
Sbjct: 667 CLPSATGRDISPSASAAGLTTRSPPIELHELQQQQQ 702


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 9.4
 Identities = 10/20 (50%), Positives = 13/20 (65%), Gaps = 1/20 (5%)
 Frame = -2

Query: 311 RRFCCMRSFDKGLLLA-CRI 255
           RR CC+R  +KG   A CR+
Sbjct: 449 RRDCCLRGGEKGHFAATCRL 468


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,081
Number of Sequences: 2352
Number of extensions: 14880
Number of successful extensions: 65
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 65
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71922660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)