Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_O23
(653 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68220-4|CAA92489.2| 408|Caenorhabditis elegans Hypothetical pr... 221 3e-58
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 28 6.7
AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical ... 28 6.7
Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical pr... 27 8.8
U49941-4|AAP46282.1| 271|Caenorhabditis elegans Hypothetical pr... 27 8.8
U49941-3|AAP46281.1| 451|Caenorhabditis elegans Hypothetical pr... 27 8.8
U49941-2|AAB53873.1| 757|Caenorhabditis elegans Hypothetical pr... 27 8.8
U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical pr... 27 8.8
AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical ... 27 8.8
>Z68220-4|CAA92489.2| 408|Caenorhabditis elegans Hypothetical
protein T20D3.7 protein.
Length = 408
Score = 221 bits (540), Expect = 3e-58
Identities = 98/163 (60%), Positives = 125/163 (76%)
Frame = +3
Query: 165 FGFGQTADIEIVFDDADKRKVAEVKTDDGKKEKLLLYYDGETVSGKVNVTLRKPGSKLEH 344
FGFGQ+A+I+I + D RK+ + + DDG LYYDGE+V+G V+V L+K K EH
Sbjct: 57 FGFGQSAEIQIRLSNEDTRKIVKARGDDGNMHDHFLYYDGESVTGTVHVNLKKANHKFEH 116
Query: 345 QGIKVELIGQIELFYDRGNHHEFISLVKELARPGDLLQHTSYPFEFANVEKPYEVYTGSN 524
QGI++E IGQIE++YDRGN +FISL +ELARPGDL Q+ +PFEF NVEKP+E Y G+N
Sbjct: 117 QGIRIEFIGQIEVYYDRGNQQDFISLTRELARPGDLTQNAQFPFEFNNVEKPFETYMGTN 176
Query: 525 VRLRYFLRATIVRRLTDITKEVDIAVHTLCXYPDVLNSIKMEV 653
V+LRYFLR T++RRLTD+TKE+D+ VH L YPD SIKMEV
Sbjct: 177 VKLRYFLRVTVIRRLTDLTKELDLVVHALSSYPDNDKSIKMEV 219
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/57 (31%), Positives = 28/57 (49%)
Frame = -2
Query: 364 SSTLMP*CSSFDPGFRNVTFTFPETVSPS*YNNNFSFLPSSVFTSATFRLSASSKTI 194
+ST+ P +S DP T T P SPS + + P+S TS T S+++ +
Sbjct: 177 TSTITP-TTSADPTSTITTSTTPNPSSPSTVQSTTTAEPTSTITSTTVPESSTTSVV 232
>AF047655-5|AAC04399.1| 820|Caenorhabditis elegans Hypothetical
protein C17B7.5 protein.
Length = 820
Score = 27.9 bits (59), Expect = 6.7
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Frame = +3
Query: 183 ADIEIVFDDADKRKVAEVKTDDGKKEKLLLYYDGETVSGKV--NVTLRKPGSKLEHQGIK 356
A+IE V D + + +D KK+ L + T+ GKV +T++ PG + + GI+
Sbjct: 678 ANIERVVDK--RLNQVYLHRNDSKKDTYLNWVFDMTIDGKVVDKLTIKVPGMEQQQLGIR 735
Query: 357 VEL 365
L
Sbjct: 736 ASL 738
>Z50016-1|CAA90318.1| 1106|Caenorhabditis elegans Hypothetical
protein T21C12.1a protein.
Length = 1106
Score = 27.5 bits (58), Expect = 8.8
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -3
Query: 282 RHNTTITFLFYHRPFSLQPP 223
RH+ T + +Y PFSL PP
Sbjct: 793 RHSKTFSLSYYFSPFSLLPP 812
>U49941-4|AAP46282.1| 271|Caenorhabditis elegans Hypothetical
protein K10B3.6c protein.
Length = 271
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 257 FFTIVRFHFSHLPFVSIIKNYFDIRRLTEPEKAHF 153
FF + F S LPF SI KNY+ + +K F
Sbjct: 43 FFLTISFSSSILPFSSIQKNYWLVTEKKNQKKKAF 77
>U49941-3|AAP46281.1| 451|Caenorhabditis elegans Hypothetical
protein K10B3.6b protein.
Length = 451
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 257 FFTIVRFHFSHLPFVSIIKNYFDIRRLTEPEKAHF 153
FF + F S LPF SI KNY+ + +K F
Sbjct: 43 FFLTISFSSSILPFSSIQKNYWLVTEKKNQKKKAF 77
>U49941-2|AAB53873.1| 757|Caenorhabditis elegans Hypothetical
protein K10B3.6a protein.
Length = 757
Score = 27.5 bits (58), Expect = 8.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = -1
Query: 257 FFTIVRFHFSHLPFVSIIKNYFDIRRLTEPEKAHF 153
FF + F S LPF SI KNY+ + +K F
Sbjct: 43 FFLTISFSSSILPFSSIQKNYWLVTEKKNQKKKAF 77
>U41010-4|AAV28333.1| 1622|Caenorhabditis elegans Hypothetical protein
T05A12.4a protein.
Length = 1622
Score = 27.5 bits (58), Expect = 8.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Frame = -1
Query: 251 TIVRFHFSHLPFVSIIKNYFDIRRLTEPEKAH 156
T+ + HF HLPFV++ +D +LT + H
Sbjct: 1032 TVKKHHFPHLPFVAL----YDTNKLTPIGRVH 1059
>AF003146-5|AAB54199.1| 299|Caenorhabditis elegans Hypothetical
protein F56F4.2 protein.
Length = 299
Score = 27.5 bits (58), Expect = 8.8
Identities = 22/80 (27%), Positives = 32/80 (40%)
Frame = +3
Query: 249 GKKEKLLLYYDGETVSGKVNVTLRKPGSKLEHQGIKVELIGQIELFYDRGNHHEFISLVK 428
G+KE L+L D T G + G + + I + E FYD G HH
Sbjct: 29 GEKETLVLAEDVFTDPGG---QFQIYGYQFQFVAIDAAVWVYHECFYDVGIHHGLCKSKM 85
Query: 429 ELARPGDLLQHTSYPFEFAN 488
E+ P + + YP + N
Sbjct: 86 EMDVPAEFRNYEKYPKKVFN 105
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,595,875
Number of Sequences: 27780
Number of extensions: 345171
Number of successful extensions: 990
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 941
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 990
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1455289764
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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