Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O22
         (795 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

04_01_0450 - 5840015-5840055,5840635-5840977,5841326-5841537,584...    30   1.8  
01_04_0056 + 15476868-15476896,15477581-15478259                       28   7.4  
08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535...    28   9.8  
03_05_0996 - 29547974-29547977,29548442-29548620,29548827-295489...    28   9.8  
02_05_0931 - 32812944-32813363,32814296-32814364,32814466-328145...    28   9.8  

>04_01_0450 -
           5840015-5840055,5840635-5840977,5841326-5841537,
           5842381-5842477
          Length = 230

 Score = 30.3 bits (65), Expect = 1.8
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 349 LRGETGGVGMENGSNQQSLWLSHGAADNSYRDS 447
           LR   GG   +  S+++ +W  HGA    +RDS
Sbjct: 17  LRSGQGGDASDTDSDEEQMWHGHGAWGEEHRDS 49


>01_04_0056 + 15476868-15476896,15477581-15478259
          Length = 235

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 11/21 (52%), Positives = 16/21 (76%)
 Frame = -3

Query: 622 QLAFINFKSQPRDDLPRIITG 560
           +L FI  K +PR+DLPR++ G
Sbjct: 168 RLDFIGSKFRPREDLPRLLRG 188


>08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,
            5350375-5350589,5351123-5351393,5351986-5352161,
            5352287-5352394,5352821-5352930,5354291-5354393,
            5354658-5354828,5354952-5355080,5355322-5355504,
            5355612-5355701,5355823-5355934,5356100-5356227,
            5357769-5357825,5357872-5357923,5358318-5358393,
            5358860-5358950,5359046-5359224,5359563-5359681,
            5359783-5359880
          Length = 1955

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 20/64 (31%), Positives = 33/64 (51%), Gaps = 5/64 (7%)
 Frame = +2

Query: 272  PYLDSNSCSFFGINYSR----SFSL-GATLACVGRRVELEWKMVQTSSRCGYRMEQRTTP 436
            P LD+N    +G  Y R    +++L G  LAC+G+  ++  K  +  +R G  + Q   P
Sbjct: 1736 PTLDTN---IYGYTYFRMENWNWNLEGEKLACLGQPGKVVVKKARQGARDGEELVQAGAP 1792

Query: 437  TETH 448
            T +H
Sbjct: 1793 TRSH 1796


>03_05_0996 -
           29547974-29547977,29548442-29548620,29548827-29548905,
           29549556-29549577,29550370-29550439,29550589-29550667,
           29551252-29551268,29552214-29552295,29553540-29553630,
           29554354-29554498,29554653-29554964
          Length = 359

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/76 (25%), Positives = 32/76 (42%)
 Frame = +2

Query: 332 LGATLACVGRRVELEWKMVQTSSRCGYRMEQRTTPTETHYAPSTSGCYTNRNPCKKFRLP 511
           +G  +   G+R E+   +V  S  CG R    +     H   S   C+ + + C  +RL 
Sbjct: 108 MGIAMVSCGQRGEMVAAIVAVS--CGQRGRDGSNNGWQHELESPDSCWAHPSICLFYRLA 165

Query: 512 RHARIPTRGQLFKENL 559
               +P+ G   +E L
Sbjct: 166 CSDLVPSSGLCTQELL 181


>02_05_0931 -
           32812944-32813363,32814296-32814364,32814466-32814572,
           32816676-32816718
          Length = 212

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 13/24 (54%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
 Frame = +1

Query: 331 FGGYFGLRGETGGVG-MENGSNQQ 399
           F G+FG     GGVG M NGS Q+
Sbjct: 184 FSGHFGQASAQGGVGSMHNGSQQR 207


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,300,563
Number of Sequences: 37544
Number of extensions: 446338
Number of successful extensions: 1134
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1099
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1134
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2150667972
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)