Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O22
         (795 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GP...    26   0.35 
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    25   1.1  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    24   1.9  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   3.3  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    22   7.5  

>DQ201783-1|ABB05503.1|  381|Apis mellifera capa receptor-like GPCR
           protein.
          Length = 381

 Score = 26.2 bits (55), Expect = 0.35
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 630 VFSLGVVPWTAEVLALAT-CSRYFLHYPWVWGILLGSIYASLS 755
           +FSL +      VL L    S ++  YPWV G+ L  I A +S
Sbjct: 79  LFSLAISDLILLVLGLPNELSLFWQQYPWVLGVSLCKIRAYVS 121


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 24.6 bits (51), Expect = 1.1
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 365 VELEWKMVQTSSRCGYRMEQRTTPTETHY 451
           +E  W  V TS + G  +EQ    + +HY
Sbjct: 434 LEKNWLPVHTSYKSGLNLEQEKKDSISHY 462


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 23.8 bits (49), Expect = 1.9
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = +3

Query: 630 VFSLGVVPWTAEVLALA-TCSRYFLHYPWVWGILLGSIYASLS 755
           +F+L V      +L L    S ++  YPW WG+ +  + A +S
Sbjct: 72  LFNLAVSDLLFLILGLPFELSVFWQQYPWQWGLGICKLRAYVS 114


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 9/27 (33%), Positives = 14/27 (51%)
 Frame = +3

Query: 648 VPWTAEVLALATCSRYFLHYPWVWGIL 728
           +PW   V ALA  +     +PW+  I+
Sbjct: 335 IPWDKNVEALAKWANGQTGFPWIDAIM 361


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 21.8 bits (44), Expect = 7.5
 Identities = 9/24 (37%), Positives = 12/24 (50%)
 Frame = +3

Query: 216 TDTEKNASKDNVKNKRTWFHTSTP 287
           T  EK    +N+K KR+W     P
Sbjct: 151 TGDEKWVVYNNIKRKRSWSRPREP 174


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 228,910
Number of Sequences: 438
Number of extensions: 5291
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 25125039
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)