Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O21
         (677 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2 p...    22   5.3  
AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    22   5.3  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    21   9.3  

>EF117815-1|ABO38438.1|  535|Tribolium castaneum cryptochrome 2
           protein.
          Length = 535

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/28 (32%), Positives = 13/28 (46%)
 Frame = -3

Query: 375 WMHSGVFFFQKTFCFCIVNCLRQACSGG 292
           W+    FF Q   C+C +   R+A   G
Sbjct: 412 WLSCSSFFQQFFHCYCPIKFGRKADPNG 439


>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 6/9 (66%), Positives = 9/9 (100%)
 Frame = -1

Query: 668 LFLFGIHHN 642
           LF++G+HHN
Sbjct: 87  LFIYGMHHN 95


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 21.0 bits (42), Expect = 9.3
 Identities = 7/28 (25%), Positives = 16/28 (57%)
 Frame = +3

Query: 33  REDNFSFIREDQRVSYIIWIGHNENDTS 116
           R+ ++ F   D+  +   W+G+ + DT+
Sbjct: 368 RKGSYIFRLPDENNNGGFWVGYEDTDTA 395


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,490
Number of Sequences: 336
Number of extensions: 2987
Number of successful extensions: 5
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 17697850
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)