Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O20
         (714 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139 prot...    25   0.54 
DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.              25   0.71 
DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.              25   0.94 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    23   3.8  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   5.0  
U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor prot...    21   8.8  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               21   8.8  
DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related pro...    21   8.8  
AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin pr...    21   8.8  

>AF274024-1|AAF90150.1|  232|Apis mellifera tetraspanin F139
           protein.
          Length = 232

 Score = 25.4 bits (53), Expect = 0.54
 Identities = 13/34 (38%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
 Frame = -1

Query: 699 ISNGLADCRVPVSRYGS--YLCDFFGCCNGFRHS 604
           I  GLA   + +   GS  ++  FFGCC   R S
Sbjct: 44  IETGLAFPSITLIVLGSIIFVISFFGCCGAIRES 77


>DQ435328-1|ABD92643.1|  143|Apis mellifera OBP11 protein.
          Length = 143

 Score = 25.0 bits (52), Expect = 0.71
 Identities = 10/29 (34%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
 Frame = -3

Query: 217 WHKILKVDMIYGE-KQFDEQHEVDATFLK 134
           W+ IL++ ++YGE    DE  E+ + + K
Sbjct: 13  WYLILQIALVYGEISDIDEFREMTSKYRK 41


>DQ288392-1|ABC41342.1|  120|Apis mellifera nanos protein.
          Length = 120

 Score = 24.6 bits (51), Expect = 0.94
 Identities = 13/44 (29%), Positives = 18/44 (40%)
 Frame = -1

Query: 714 YLXHCISNGLADCRVPVSRYGSYLCDFFGCCNGFRHSFKFLFNG 583
           Y  H + +  AD RV      +Y C   G C    H+ K+   G
Sbjct: 53  YRKHLLKD--ADGRVSCPVLRAYTCPICGACGDIAHTVKYCPKG 94


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 10/26 (38%), Positives = 11/26 (42%)
 Frame = -1

Query: 648 YLCDFFGCCNGFRHSFKFLFNGXYGE 571
           Y CD  G   G+ H  K      YGE
Sbjct: 232 YTCDICGKSFGYNHVLKLHQVAHYGE 257


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 5.0
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = -2

Query: 386 TPLATVTPSFVIFGDPQ 336
           +P A + P  V++G+PQ
Sbjct: 98  SPSAALQPQHVVYGNPQ 114


>U15955-1|AAA67443.1|   95|Apis mellifera defensin precursor
           protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 135 FKNVASTSCCSSNCFS 182
           FK   + S C++NC S
Sbjct: 51  FKGQVNDSACAANCLS 66


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = -3

Query: 697 QQWACRLPCP 668
           QQW CR P P
Sbjct: 485 QQWTCRQPEP 494


>DQ015969-1|AAY81926.1|  397|Apis mellifera stargazin related
           protein STG-1 protein.
          Length = 397

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 5/12 (41%), Positives = 11/12 (91%)
 Frame = +2

Query: 182 SINHINFQDFMP 217
           S++H++F +F+P
Sbjct: 310 SVDHVDFDEFLP 321


>AY496432-1|AAS75803.1|   95|Apis mellifera defensin/royalisin
           precursor protein.
          Length = 95

 Score = 21.4 bits (43), Expect = 8.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 135 FKNVASTSCCSSNCFS 182
           FK   + S C++NC S
Sbjct: 51  FKGQVNDSACAANCLS 66


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,828
Number of Sequences: 438
Number of extensions: 3933
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22048515
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)