Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_O19
(549 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processin... 174 1e-43
AK222905-1|BAD96625.1| 398|Homo sapiens U5 snRNP-specific prote... 174 1e-43
AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8 pr... 174 1e-43
AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein. 174 1e-43
U57317-1|AAC50890.2| 832|Homo sapiens p300/CBP-associated facto... 30 6.1
U57316-1|AAC50641.1| 476|Homo sapiens GCN5 protein. 30 6.1
BC105977-1|AAI05978.1| 837|Homo sapiens GCN5 general control of... 30 6.1
BC070075-1|AAH70075.1| 832|Homo sapiens p300/CBP-associated fac... 30 6.1
BC060823-1|AAH60823.1| 832|Homo sapiens p300/CBP-associated fac... 30 6.1
BC039907-1|AAH39907.1| 837|Homo sapiens GCN5 general control of... 30 6.1
BC032743-1|AAH32743.1| 837|Homo sapiens GCN5 general control of... 30 6.1
AF029777-1|AAC39769.1| 837|Homo sapiens hGCN5 protein. 30 6.1
>BC064370-1|AAH64370.1| 2335|Homo sapiens PRP8 pre-mRNA processing
factor 8 homolog (S. cerevisiae) protein.
Length = 2335
Score = 174 bits (424), Expect = 1e-43
Identities = 74/97 (76%), Positives = 87/97 (89%)
Frame = +1
Query: 10 DTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGN 189
+TD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNYNFMGVRHDPNMKY +QL N
Sbjct: 2241 NTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLAN 2300
Query: 190 PREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 300
P+EFYHEVHRP+HF+NFA +++ +ADREDL+A
Sbjct: 2301 PKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335
>AK222905-1|BAD96625.1| 398|Homo sapiens U5 snRNP-specific protein
variant protein.
Length = 398
Score = 174 bits (424), Expect = 1e-43
Identities = 74/97 (76%), Positives = 87/97 (89%)
Frame = +1
Query: 10 DTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGN 189
+TD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNYNFMGVRHDPNMKY +QL N
Sbjct: 304 NTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLAN 363
Query: 190 PREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 300
P+EFYHEVHRP+HF+NFA +++ +ADREDL+A
Sbjct: 364 PKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 398
>AF092565-1|AAC61776.1| 2335|Homo sapiens splicing factor Prp8
protein.
Length = 2335
Score = 174 bits (424), Expect = 1e-43
Identities = 74/97 (76%), Positives = 87/97 (89%)
Frame = +1
Query: 10 DTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGN 189
+TD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNYNFMGVRHDPNMKY +QL N
Sbjct: 2241 NTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLAN 2300
Query: 190 PREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 300
P+EFYHEVHRP+HF+NFA +++ +ADREDL+A
Sbjct: 2301 PKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335
>AB007510-1|BAA22563.1| 2335|Homo sapiens PRP8 protein protein.
Length = 2335
Score = 174 bits (424), Expect = 1e-43
Identities = 74/97 (76%), Positives = 87/97 (89%)
Frame = +1
Query: 10 DTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGN 189
+TD+GNNPKGYLPSHYERVQMLLSDRFLG+FMVP+Q SWNYNFMGVRHDPNMKY +QL N
Sbjct: 2241 NTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLAN 2300
Query: 190 PREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 300
P+EFYHEVHRP+HF+NFA +++ +ADREDL+A
Sbjct: 2301 PKEFYHEVHRPSHFLNFALLQE--GEVYSADREDLYA 2335
>U57317-1|AAC50890.2| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 29.9 bits (64), Expect = 6.1
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 213
P H + + ++ R +G + M PSQG F V + +K YG L N + YH
Sbjct: 541 PKH-KTLALIKDGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 599
Query: 214 HRPAHFMNFA 243
H +F+ +A
Sbjct: 600 HDILNFLTYA 609
>U57316-1|AAC50641.1| 476|Homo sapiens GCN5 protein.
Length = 476
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 213
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 185 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 243
Query: 214 HRPAHFMNFA 243
H +F+ +A
Sbjct: 244 HNILYFLTYA 253
>BC105977-1|AAI05978.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 213
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 546 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 604
Query: 214 HRPAHFMNFA 243
H +F+ +A
Sbjct: 605 HNILYFLTYA 614
>BC070075-1|AAH70075.1| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 29.9 bits (64), Expect = 6.1
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 213
P H + + ++ R +G + M PSQG F V + +K YG L N + YH
Sbjct: 541 PKH-KTLALIKDGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 599
Query: 214 HRPAHFMNFA 243
H +F+ +A
Sbjct: 600 HDILNFLTYA 609
>BC060823-1|AAH60823.1| 832|Homo sapiens p300/CBP-associated factor
protein.
Length = 832
Score = 29.9 bits (64), Expect = 6.1
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 213
P H + + ++ R +G + M PSQG F V + +K YG L N + YH
Sbjct: 541 PKH-KTLALIKDGRVIGGICFRMFPSQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 599
Query: 214 HRPAHFMNFA 243
H +F+ +A
Sbjct: 600 HDILNFLTYA 609
>BC039907-1|AAH39907.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 213
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 546 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 604
Query: 214 HRPAHFMNFA 243
H +F+ +A
Sbjct: 605 HNILYFLTYA 614
>BC032743-1|AAH32743.1| 837|Homo sapiens GCN5 general control of
amino-acid synthesis 5-like 2 (yeast) protein.
Length = 837
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 213
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 546 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 604
Query: 214 HRPAHFMNFA 243
H +F+ +A
Sbjct: 605 HNILYFLTYA 614
>AF029777-1|AAC39769.1| 837|Homo sapiens hGCN5 protein.
Length = 837
Score = 29.9 bits (64), Expect = 6.1
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +1
Query: 46 PSHYERVQMLLSDRFLG---YFMVPSQGSWNYNFMGVRHDPNMK-YGVQLGNPREFYHEV 213
P H + + ++ R +G + M P+QG F V + +K YG L N + YH
Sbjct: 546 PKH-KTLALIKDGRVIGGICFRMFPTQGFTEIVFCAVTSNEQVKGYGTHLMNHLKEYHIK 604
Query: 214 HRPAHFMNFA 243
H +F+ +A
Sbjct: 605 HNILYFLTYA 614
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 67,005,768
Number of Sequences: 237096
Number of extensions: 1339563
Number of successful extensions: 2618
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 2446
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2613
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5421005376
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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