Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O19
         (549 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051826-1|AAK93250.1| 1328|Drosophila melanogaster LD33339p pro...   163   2e-40
AE013599-1403|AAF58573.1| 2396|Drosophila melanogaster CG8877-PA...   163   2e-40
AE014134-1817|ABC65890.1|  281|Drosophila melanogaster CG34043-P...    30   2.4  
X79340-1|CAA55898.2|  213|Drosophila melanogaster musashi protein.     28   9.6  
X79339-1|CAA55897.1|  606|Drosophila melanogaster musashi protein.     28   9.6  
AY051802-1|AAK93226.1|  606|Drosophila melanogaster LD31631p pro...    28   9.6  
AE014297-3816|AAF56478.2|  606|Drosophila melanogaster CG5099-PA...    28   9.6  

>AY051826-1|AAK93250.1| 1328|Drosophila melanogaster LD33339p protein.
          Length = 1328

 Score =  163 bits (395), Expect = 2e-40
 Identities = 69/97 (71%), Positives = 84/97 (86%)
 Frame = +1

Query: 10   DTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGN 189
            +TD+GNNPKGYLPSHYERVQMLLS++FLG+FMVP+Q SWNYNFMGVRHDPNMKY +QL N
Sbjct: 1233 NTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLAN 1292

Query: 190  PREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 300
            P+EFYHE+HR +HF+ F+ +ED       ADRED++A
Sbjct: 1293 PKEFYHELHRTSHFLLFSNLED-GGDGAGADREDVYA 1328


>AE013599-1403|AAF58573.1| 2396|Drosophila melanogaster CG8877-PA
            protein.
          Length = 2396

 Score =  163 bits (395), Expect = 2e-40
 Identities = 69/97 (71%), Positives = 84/97 (86%)
 Frame = +1

Query: 10   DTDRGNNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNMKYGVQLGN 189
            +TD+GNNPKGYLPSHYERVQMLLS++FLG+FMVP+Q SWNYNFMGVRHDPNMKY +QL N
Sbjct: 2301 NTDKGNNPKGYLPSHYERVQMLLSNKFLGFFMVPAQSSWNYNFMGVRHDPNMKYELQLAN 2360

Query: 190  PREFYHEVHRPAHFMNFAAMEDAAAPTIAADREDLFA 300
            P+EFYHE+HR +HF+ F+ +ED       ADRED++A
Sbjct: 2361 PKEFYHELHRTSHFLLFSNLED-GGDGAGADREDVYA 2396


>AE014134-1817|ABC65890.1|  281|Drosophila melanogaster CG34043-PA
           protein.
          Length = 281

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 4/73 (5%)
 Frame = +1

Query: 25  NNPKGYLPSHYERVQMLLSDRFLGYFMVPSQGSWNYNFMGVRHDPNM----KYGVQLGNP 192
           N+ +  L + Y+     L +    Y    + G   Y   GV H+ N+     YG+ L N 
Sbjct: 126 NDIEWVLVADYDITDFPLEEGVESYVWKNADGENIYPGYGVIHESNLVGIISYGLPLKNK 185

Query: 193 REFYHEVHRPAHF 231
           RE   EV RP  F
Sbjct: 186 RESNLEVRRPNRF 198


>X79340-1|CAA55898.2|  213|Drosophila melanogaster musashi protein.
          Length = 213

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 254 MLQHQQSPPTEKTCSHKFNLEAFFYA 331
           +L HQQ PP      H    ++FFYA
Sbjct: 10  VLHHQQPPPPTSGEDHLLTADSFFYA 35


>X79339-1|CAA55897.1|  606|Drosophila melanogaster musashi protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 254 MLQHQQSPPTEKTCSHKFNLEAFFYA 331
           +L HQQ PP      H    ++FFYA
Sbjct: 10  VLHHQQPPPPTSGEDHLLTADSFFYA 35


>AY051802-1|AAK93226.1|  606|Drosophila melanogaster LD31631p
           protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 254 MLQHQQSPPTEKTCSHKFNLEAFFYA 331
           +L HQQ PP      H    ++FFYA
Sbjct: 10  VLHHQQPPPPTSGEDHLLTADSFFYA 35


>AE014297-3816|AAF56478.2|  606|Drosophila melanogaster CG5099-PA,
           isoform A protein.
          Length = 606

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +2

Query: 254 MLQHQQSPPTEKTCSHKFNLEAFFYA 331
           +L HQQ PP      H    ++FFYA
Sbjct: 10  VLHHQQPPPPTSGEDHLLTADSFFYA 35


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,045,725
Number of Sequences: 53049
Number of extensions: 430435
Number of successful extensions: 1106
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1095
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1106
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2089831299
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)