Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_O18
(783 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
05_07_0153 - 28051496-28051801,28051933-28052271 33 0.19
09_01_0076 + 1105331-1105453,1106559-1106705,1107046-1107195,110... 33 0.26
04_04_0411 - 25014511-25015015,25015098-25015169,25015700-250157... 31 1.4
02_05_0548 + 29896648-29896701,29896818-29897021,29897451-298977... 30 1.8
01_01_0509 - 3713109-3713244,3713689-3713733,3713959-3714015,371... 30 1.8
10_08_0829 - 20871810-20872011,20873226-20873359,20873480-208773... 30 2.4
01_06_1052 + 34129126-34130490 30 2.4
08_02_1453 - 27199228-27200579,27200712-27202646,27202905-272029... 29 3.2
07_01_0987 + 8320205-8320472,8321549-8321690,8321773-8321893,832... 29 4.2
06_03_1308 - 29221583-29221630,29221709-29221786,29221908-292219... 29 4.2
06_03_0270 + 19009412-19009888,19009936-19011048,19011810-190118... 29 5.5
04_04_1650 - 35051728-35051823,35052054-35052162,35052270-350524... 29 5.5
08_01_0655 + 5646567-5646650,5646675-5647697,5648227-5648382,564... 28 7.3
01_01_0568 - 4207812-4209587,4210056-4210291,4210647-4210793,421... 28 7.3
11_04_0460 - 17955102-17955146,17955253-17955310,17955442-179555... 28 9.6
05_03_0013 + 7362056-7362471,7363235-7364081,7364272-7364758,736... 28 9.6
>05_07_0153 - 28051496-28051801,28051933-28052271
Length = 214
Score = 33.5 bits (73), Expect = 0.19
Identities = 15/30 (50%), Positives = 18/30 (60%)
Frame = +1
Query: 88 CGPRMRQPARSACAATSPTKPRSLDTRLAY 177
CG R ++ R A AA +PT P SLDT Y
Sbjct: 119 CGIRYKKEERRAAAAVAPTPPPSLDTGAGY 148
>09_01_0076 +
1105331-1105453,1106559-1106705,1107046-1107195,
1107272-1107531,1107897-1108084,1108187-1108311,
1108485-1108521,1108802-1108893,1109023-1109133,
1109242-1109352,1109576-1109669,1109833-1109945,
1110316-1110411,1110510-1110617,1110665-1110814,
1110910-1110990,1111205-1111276,1111553-1111646,
1111759-1111787,1111870-1111967,1112065-1112160,
1112399-1112620,1113002-1113158,1113472-1113627,
1113703-1113930
Length = 1045
Score = 33.1 bits (72), Expect = 0.26
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Frame = +1
Query: 430 NEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQ 609
N +LEQ + + D + L GK LLE +E + A++Q ++ + + + + Q
Sbjct: 510 NRQLEQKESEMKMYGSDTVALKQHFGKKLLELEEE-KRAVQQERDRLLAEVESLN-ADGQ 567
Query: 610 TVALREVNDSRLRIYE-QLELSIQDLE 687
T LR+ +L+ E Q L IQDL+
Sbjct: 568 THKLRDAQLQKLKTLEAQYMLVIQDLD 594
>04_04_0411 -
25014511-25015015,25015098-25015169,25015700-25015734,
25015805-25015873,25015993-25016044,25016444-25016526,
25016625-25016726,25017150-25017884,25017962-25018012,
25018792-25018983,25019066-25019216,25020012-25020193,
25020329-25020532,25020752-25020859
Length = 846
Score = 30.7 bits (66), Expect = 1.4
Identities = 32/133 (24%), Positives = 58/133 (43%), Gaps = 9/133 (6%)
Frame = +1
Query: 163 TRLAYIEQPFDTDIERQM*NRLVKFF---------SYSRSFTVITRFVKFRRRYISWSPS 315
TR+ E P+D D+ + + R+V+ F SY+R ++ K R +
Sbjct: 89 TRITAPEAPYDDDVMKDVFTRVVEAFEKLDDMESPSYARRVAMLETVAKVRSCVLMLDLD 148
Query: 316 RCALCLVYVTRIHRCIA*CHKQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLA 495
L R I+ H++ ++ + ++K +E+++QD C+L D LA
Sbjct: 149 CDDLIRDMFHHFFRTISNTHQENVITSMETVMKFVIDESEDVQQD---MPSCLLQD--LA 203
Query: 496 AELGKTLLERNKE 534
+ L K L + KE
Sbjct: 204 SYLLKNLKKEEKE 216
>02_05_0548 +
29896648-29896701,29896818-29897021,29897451-29897708,
29897821-29898036,29898130-29898285,29898396-29898707,
29898795-29898882,29899055-29899203,29899390-29899722
Length = 589
Score = 30.3 bits (65), Expect = 1.8
Identities = 21/70 (30%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Frame = +1
Query: 499 ELGKTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYE--QLELS 672
+LGK ER KEL + + + + A +E Q VAL ++N+ L + + + +L
Sbjct: 107 QLGKKKKERIKELANIQSRIEQIRGEIAGTLEM--GQQVALPQINEDDLTVRKLREFQLQ 164
Query: 673 IQDLERANHR 702
+Q+LE+ R
Sbjct: 165 LQELEKEKSR 174
>01_01_0509 -
3713109-3713244,3713689-3713733,3713959-3714015,
3714088-3714438,3714585-3714862,3714939-3715289,
3715378-3715647,3716035-3716103,3716194-3716304,
3716503-3716583,3716825-3716914,3717032-3717262
Length = 689
Score = 30.3 bits (65), Expect = 1.8
Identities = 14/36 (38%), Positives = 18/36 (50%)
Frame = +3
Query: 444 ARRSHLTSLYARRFATGGRTRENPTRTQQGTRDSPS 551
AR HL + RR G +N T+Q TR +PS
Sbjct: 97 ARNDHLNDHFERRTEAAGSHAQNVPFTEQNTRSNPS 132
>10_08_0829 - 20871810-20872011,20873226-20873359,20873480-20877313,
20878057-20878177,20878414-20878451,20879096-20879218,
20879308-20879505,20880270-20880356
Length = 1578
Score = 29.9 bits (64), Expect = 2.4
Identities = 30/130 (23%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Frame = +1
Query: 388 MSEVMDLVKKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTL--LERNK-ELETALRQH 558
M E L+ E++E + + M + L L L +E K EL+ + +
Sbjct: 812 MDESRSLITNLKDELEQVEAQKVELKLQMDESRSLITNLKDELEQVEAQKVELKLQMDES 871
Query: 559 QNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL--XVDHAADK- 729
+++I + E+E + Q V L+E R +++ + L R+N +L VDH ++
Sbjct: 872 RSLITNLKDELEQVEAQKVELKENQLESHRRLSEVQEDSEALRRSNAKLQATVDHVVEEC 931
Query: 730 KHIKSLCSNI 759
K +++L +++
Sbjct: 932 KSLQTLTADL 941
>01_06_1052 + 34129126-34130490
Length = 454
Score = 29.9 bits (64), Expect = 2.4
Identities = 16/46 (34%), Positives = 22/46 (47%)
Frame = +1
Query: 22 RDNASCTYSTPWLVQYSVDKMRCGPRMRQPARSACAATSPTKPRSL 159
RD +C YS S+ + GP R+P R AT+P P +L
Sbjct: 133 RDPVTCAYSVT-----SIGEYHSGPLARKPRRGGTNATAPPPPPAL 173
>08_02_1453 -
27199228-27200579,27200712-27202646,27202905-27202966,
27203525-27203545,27204305-27204344,27204345-27204792,
27204866-27204964,27205071-27205394,27205446-27205574,
27205657-27205875,27205976-27206194,27206436-27206669,
27206773-27206943,27207466-27207577,27207955-27208010,
27208083-27208181,27208901-27209134,27209258-27209311,
27209363-27209422
Length = 1955
Score = 29.5 bits (63), Expect = 3.2
Identities = 19/69 (27%), Positives = 32/69 (46%)
Frame = +1
Query: 514 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERA 693
L E+ KEL T R+ N ++AQ ++ + LRE L + EQ + ++
Sbjct: 157 LREQTKELATFRRERDNSEAERAQHLKQIHDLQEHLREKESQMLALEEQHRAAQDNIIYK 216
Query: 694 NHRLXVDHA 720
+ +L HA
Sbjct: 217 DEQLREAHA 225
>07_01_0987 +
8320205-8320472,8321549-8321690,8321773-8321893,
8322190-8322264,8322784-8322846,8322934-8323086
Length = 273
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/46 (30%), Positives = 23/46 (50%)
Frame = +1
Query: 526 NKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQL 663
NKE ++QH + D ++EIE K + EV + L E++
Sbjct: 133 NKEYGPVIKQHMQYVLDHSEEIEKTLKVQAQVSEVKNIMLENIEKV 178
>06_03_1308 -
29221583-29221630,29221709-29221786,29221908-29221952,
29222075-29222187,29222283-29222406
Length = 135
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/55 (30%), Positives = 25/55 (45%)
Frame = +3
Query: 396 SNGSGEEEIRWKRRAGARRSHLTSLYARRFATGGRTRENPTRTQQGTRDSPSPAS 560
S G G++++R KR A+ TS GG N + + QGT P+ S
Sbjct: 41 SGGDGKQQVRIKRPKSAKALQCTSKCVATCIRGGEGPLNASGSFQGTIPQPAVLS 95
>06_03_0270 +
19009412-19009888,19009936-19011048,19011810-19011899,
19011928-19012027,19012135-19012333,19012559-19012679
Length = 699
Score = 28.7 bits (61), Expect = 5.5
Identities = 28/134 (20%), Positives = 57/134 (42%), Gaps = 2/134 (1%)
Frame = +1
Query: 292 RYISWSPSRCALCLVYVTRIHRCIA*CHKQ*TMSEVMDLVKKKFGGNEELEQDDLTSRRC 471
+YI WSP+ C + Y + + + + ++ E + + + E L ++ L
Sbjct: 481 KYIEWSPANCYAWMKY-AELEKSLGETDRARSIYE-LAIAQSALDTPEVLWKEYL-QFEI 537
Query: 472 MLDDLQLAAELGKTLLERNKELETA--LRQHQNVIEDQAQEIEYLTKQTVALREVNDSRL 645
++ EL + LL+R K+L+ + L + E+ E+ Y +Q +R
Sbjct: 538 DKNEFHRTCELYERLLDRTKDLKASVGLGGEDSQSEEIKNEVSYQQQQIEQVRRCRAVFE 597
Query: 646 RIYEQLELSIQDLE 687
R +E S +L+
Sbjct: 598 RAFEYFRTSAPELK 611
>04_04_1650 -
35051728-35051823,35052054-35052162,35052270-35052416,
35052516-35052637,35052726-35052825,35052895-35053095,
35053202-35053407,35053778-35053803,35054239-35054327,
35054427-35054635,35055577-35055672,35055754-35055924
Length = 523
Score = 28.7 bits (61), Expect = 5.5
Identities = 15/44 (34%), Positives = 20/44 (45%)
Frame = +1
Query: 574 DQAQEIEYLTKQTVALREVNDSRLRIYEQLELSIQDLERANHRL 705
D+ +EY + R ND R+ E L +I LE HRL
Sbjct: 111 DKLTSVEYFFTSKIRCRVGNDVHERVNELLSKAIHGLENEFHRL 154
>08_01_0655 +
5646567-5646650,5646675-5647697,5648227-5648382,
5648499-5648529,5648636-5648808
Length = 488
Score = 28.3 bits (60), Expect = 7.3
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +1
Query: 412 KKKFGGNEELEQDDLTSRRCMLDDLQLAAELGKTLLERNKELET 543
KKKF G + L D++ L+L A+ G+ +L N+EL+T
Sbjct: 337 KKKFNGGKVLGGDNVLHSLSNARSLELLADAGEVIL--NRELKT 378
>01_01_0568 -
4207812-4209587,4210056-4210291,4210647-4210793,
4211857-4212145
Length = 815
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/53 (33%), Positives = 29/53 (54%)
Frame = +1
Query: 508 KTLLERNKELETALRQHQNVIEDQAQEIEYLTKQTVALREVNDSRLRIYEQLE 666
KT+ N+ELE ++Q Q E + L + T +L E+N S L + ++LE
Sbjct: 628 KTVTTLNRELEALVKQLQMDSEARKALEADLDEATKSLDEMNRSALSLSKELE 680
>11_04_0460 -
17955102-17955146,17955253-17955310,17955442-17955593,
17955888-17955993,17956101-17956222,17956766-17956834,
17956969-17957214,17957331-17957373,17957449-17957520,
17957954-17958066,17958158-17958238,17958343-17958415,
17959413-17959519,17960410-17960514,17960684-17960974,
17961621-17961707,17961774-17961842,17961917-17961973,
17962057-17962155,17962223-17962312,17962395-17962511,
17964164-17964244,17964353-17964502,17964812-17964956,
17967359-17967510,17967647-17967784,17967838-17967914,
17968032-17968134
Length = 1015
Score = 27.9 bits (59), Expect = 9.6
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +1
Query: 442 EQDDLTSRRCMLDDLQLAAELGKTLLERNKELETALRQHQNVIEDQAQEIE 594
+++DL ++ C + G+T LE N ELE R++ V D QE++
Sbjct: 228 QKEDLHAKACSAPPKEF---FGQTQLEWNWELEDEFRRYLPVYFDTMQEVD 275
>05_03_0013 +
7362056-7362471,7363235-7364081,7364272-7364758,
7365062-7365126,7365275-7365643
Length = 727
Score = 27.9 bits (59), Expect = 9.6
Identities = 20/68 (29%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Frame = +1
Query: 514 LLERNKELETALRQHQNVIEDQAQEIEYLTKQTVAL----REVNDSRLRIYEQLELSIQD 681
LL R KELE + HQ V ++A + L + L ++V +R E+ ++Q+
Sbjct: 492 LLARRKELEKLVLSHQEVSRERAISEDKLKARISDLEKEKKQVEFARQAEEEKTTSALQE 551
Query: 682 LERANHRL 705
L+ A +L
Sbjct: 552 LDNARQQL 559
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,648,946
Number of Sequences: 37544
Number of extensions: 427245
Number of successful extensions: 1301
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 1264
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1301
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2103658836
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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