Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_O16
(778 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0362 + 7860088-7860197,7861606-7861636,7861738-7861801,786... 31 0.77
07_01_0716 + 5472618-5472818,5472943-5472985,5473672-5473761,547... 31 0.77
06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330 31 0.77
08_02_1037 - 23851750-23852132,23852622-23852784 31 1.3
07_01_0951 - 8001093-8001344,8001475-8001990,8002057-8002209,800... 30 2.4
06_01_0741 - 5510159-5510581,5510862-5511124,5511223-5511400,551... 30 2.4
01_01_0066 - 513578-513730,513809-513920,514000-514163,514369-51... 30 2.4
12_01_0317 + 2417147-2417587,2417622-2418134 29 3.1
12_01_0072 + 609254-609722,610355-610421,610652-610745,610984-61... 29 3.1
11_03_0105 + 10040421-10040891,10041375-10041499,10041884-10042748 29 3.1
10_08_0631 - 19435796-19436452,19437237-19438130 29 3.1
01_03_0260 - 14323503-14323603,14323751-14323990,14324212-143242... 29 3.1
01_01_1162 - 9253034-9254229,9254387-9254456,9254473-9254567,925... 29 3.1
03_05_0437 - 24293236-24294120 29 4.1
01_06_0685 - 31218716-31218873,31218974-31219266,31219366-312195... 29 4.1
01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833 29 4.1
05_07_0146 + 28018236-28018580,28018670-28018777,28018984-280191... 29 5.4
10_06_0179 - 11508235-11508245,11508555-11508942 28 7.2
10_01_0216 - 2329413-2330419,2331382-2331537,2332363-2332897,233... 28 7.2
09_04_0373 - 17037945-17040641 28 7.2
06_03_0969 - 26413534-26413594,26415020-26415318 28 7.2
06_01_1013 - 7931756-7935109 28 7.2
03_06_0069 - 31449319-31450368 28 7.2
01_06_1824 - 40146757-40147648,40150119-40150441 28 7.2
07_03_1116 - 24084162-24084201,24084481-24084570,24084640-240852... 28 9.5
05_01_0433 - 3432675-3432922,3433043-3433304,3433413-3433567,343... 28 9.5
04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378 28 9.5
02_05_1052 + 33770355-33773981,33774217-33774336,33774880-337749... 28 9.5
>09_02_0362 +
7860088-7860197,7861606-7861636,7861738-7861801,
7861922-7862052,7863575-7863784,7863891-7863956,
7864868-7865075,7866270-7866325,7866406-7867128,
7868246-7868299,7868667-7868695,7869501-7869585,
7870032-7870202,7870246-7870827
Length = 839
Score = 31.5 bits (68), Expect = 0.77
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 5/47 (10%)
Frame = -3
Query: 509 LQPVRELAEVHAVQRHLEGARLAQHQRL--EGLPVGVQR---HPARR 384
LQP +L + H +Q+ L+ +L QH +L +GLP+ Q+ HP ++
Sbjct: 678 LQPQNQLQQQHQLQQQLQQQQLQQHMQLQTQGLPLQQQQSQGHPLQQ 724
>07_01_0716 +
5472618-5472818,5472943-5472985,5473672-5473761,
5473863-5473938,5474435-5474504,5474911-5475075,
5475261-5475404,5475547-5475651,5475876-5476022,
5476463-5476531,5476882-5476989,5477392-5477483,
5477559-5477598,5478129-5478221,5478386-5478958,
5479596-5479610
Length = 676
Score = 31.5 bits (68), Expect = 0.77
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 2/46 (4%)
Frame = -1
Query: 475 PFSATLRARGSHSTSASK--VSPLACSGIPPAVSSAPQLMLLRWFR 344
P S+ + A GS +T A + S SGIPPA S P + L W R
Sbjct: 540 PSSSAVTAGGSTATIAGEGSTSDSGLSGIPPAASPPPPPLPLSWRR 585
>06_03_0996 + 26731442-26732121,26732573-26732772,26732930-26733330
Length = 426
Score = 31.5 bits (68), Expect = 0.77
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = -1
Query: 478 TPFSATLRARGSHSTSASKVSPLACSGIPPAVSSAPQL 365
T + L +G H+ +A++ + L G PP SSAPQ+
Sbjct: 309 TSVISCLPEQGKHAAAAARPTALTLGGAPPHESSAPQI 346
>08_02_1037 - 23851750-23852132,23852622-23852784
Length = 181
Score = 30.7 bits (66), Expect = 1.3
Identities = 26/78 (33%), Positives = 36/78 (46%), Gaps = 8/78 (10%)
Frame = -1
Query: 580 CA-PSNPMNCTSTSPSTV---RCEMRWY-CS---RCGNSQKCTPFSATLRARGSHSTSAS 425
CA SN ++ TSTSP+T+ M +Y C+ C K + GS S +
Sbjct: 75 CAVASNSISSTSTSPATLDLAAAGMHYYICTISGHCAGGMKLAINVGSGSGSGSGSGTPP 134
Query: 424 KVSPLACSGIPPAVSSAP 371
+P SG PPA S+P
Sbjct: 135 STTP-GSSGTPPATPSSP 151
>07_01_0951 -
8001093-8001344,8001475-8001990,8002057-8002209,
8002272-8002568
Length = 405
Score = 29.9 bits (64), Expect = 2.4
Identities = 24/78 (30%), Positives = 30/78 (38%)
Frame = -3
Query: 395 PARRLLGAPAHVAEVVPHDAHLHEAEVEVQRDVVPRVRVGSALQVDREPLCAGRHSXPGC 216
P RLLGAP P + R V+ V +GS ++DRE G
Sbjct: 227 PMHRLLGAPEEHGLHAPDSGCVAWLHAHSPRSVL-YVSLGSVARIDREVFDEMALGLAGS 285
Query: 215 GACALGTCRPGWGARTVS 162
G L RPG+ VS
Sbjct: 286 GVPFLWVIRPGFVTGIVS 303
>06_01_0741 -
5510159-5510581,5510862-5511124,5511223-5511400,
5511411-5511698,5511801-5511899,5511973-5512440,
5512559-5512744,5512887-5513004,5513035-5513228
Length = 738
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 2/54 (3%)
Frame = -3
Query: 500 VRELAEVHAVQRHL--EGARLAQHQRLEGLPVGVQRHPARRLLGAPAHVAEVVP 345
V E + ++ + R L GA H+ L L +R+ + LG P H+A V P
Sbjct: 460 VEEKSPINVLYRDLVLSGAAFGAHRWLAALQRACERYASLVALGVPHHIAGVTP 513
>01_01_0066 -
513578-513730,513809-513920,514000-514163,514369-514521,
514598-514736,514823-514923,514995-515666,515953-516038,
516112-516777,516874-517128,517231-517358,518645-518799,
518880-519133,519186-519260,519324-519399,519511-519644,
519871-520153,520692-520850,520940-521038,521142-521310,
521423-521653,522002-522114,524179-524310,524389-524469,
525641-525763
Length = 1570
Score = 29.9 bits (64), Expect = 2.4
Identities = 18/56 (32%), Positives = 21/56 (37%)
Frame = +2
Query: 188 GGMYPGRMLRIQGQSAARRTEVRDQPAVRTQHGPAGRHRAAPQLPLRGDVRRAEPP 355
GGM R + G R R P + QH P G AA P A+PP
Sbjct: 125 GGMKRARDDALMGSQLKRPNVGRSDPTAQPQHMPLGPASAAAPPPQAAAAPPAQPP 180
>12_01_0317 + 2417147-2417587,2417622-2418134
Length = 317
Score = 29.5 bits (63), Expect = 3.1
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = -1
Query: 550 STSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSA--SKVSPLACSGIPPAVSS 377
S S + +R + S G+ CT S+T RGS + A S +S A + A SS
Sbjct: 3 SASSLLLPSSVRDFASCIGDGAACTAPSSTRTRRGSAAVQAQPSTLSVTASYRVALASSS 62
Query: 376 APQLML-LRW 350
+P L L L W
Sbjct: 63 SPPLQLRLTW 72
>12_01_0072 +
609254-609722,610355-610421,610652-610745,610984-611127
Length = 257
Score = 29.5 bits (63), Expect = 3.1
Identities = 20/77 (25%), Positives = 32/77 (41%), Gaps = 3/77 (3%)
Frame = -1
Query: 574 PSNPMNCTSTSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSASKVSPLACSG- 398
PS P N + P + + S C S TP S A G + S + L CS
Sbjct: 41 PSTPTNPITARPRPLPSDTTAAASTCSASPSHTPVSKPSSATGETAAPQSNLCALRCSSW 100
Query: 397 --IPPAVSSAPQLMLLR 353
+ A+++A + L++
Sbjct: 101 DFLTLAIAAAEERSLVK 117
>11_03_0105 + 10040421-10040891,10041375-10041499,10041884-10042748
Length = 486
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = +1
Query: 634 TALRPPPTEPRATVRSKGSTEESGRGA 714
T+L PPP P AT S +T E RGA
Sbjct: 18 TSLHPPPCSPAATAASATTTCEPVRGA 44
>10_08_0631 - 19435796-19436452,19437237-19438130
Length = 516
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -1
Query: 427 SKVSPLACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCS 305
SK L CS IP +S L RTT I TK+ ++C+
Sbjct: 476 SKRWHLVCSNIPNNISYLVSTFTLANCRTTDIGTKKVMQCA 516
>01_03_0260 - 14323503-14323603,14323751-14323990,14324212-14324275,
14324349-14324654,14324841-14325055,14325551-14325845,
14325965-14326129,14326324-14327352,14333553-14333814,
14334135-14334631,14338714-14340123
Length = 1527
Score = 29.5 bits (63), Expect = 3.1
Identities = 14/27 (51%), Positives = 16/27 (59%)
Frame = -1
Query: 394 PPAVSSAPQLMLLRWFRTTHISTKRKL 314
P V P LML WFR +IST R+L
Sbjct: 1105 PSVVLVVPLLMLNLWFRKYYISTSREL 1131
>01_01_1162 -
9253034-9254229,9254387-9254456,9254473-9254567,
9255344-9255487,9255514-9255622
Length = 537
Score = 29.5 bits (63), Expect = 3.1
Identities = 13/22 (59%), Positives = 15/22 (68%)
Frame = +2
Query: 704 VGALSTPAPRTAPCHTPTDAPS 769
+GA STP+PR AP DAPS
Sbjct: 242 LGAASTPSPRPAPATPLPDAPS 263
>03_05_0437 - 24293236-24294120
Length = 294
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = -1
Query: 412 LACSGIPPAVSSAPQLMLLRWFRTTHISTKRKLRCSAMSSRGSVLGPHCRLIANLCAPGG 233
LA +PPA + +L RW R TH+ K S+ + + L HC +A L G
Sbjct: 131 LALPELPPADDARLPSLLPRWRRLTHLELDSK--PSSFPAVAAALALHCPDLAVLRVTSG 188
Query: 232 TL 227
++
Sbjct: 189 SV 190
>01_06_0685 -
31218716-31218873,31218974-31219266,31219366-31219559,
31219666-31220409,31221504-31221824
Length = 569
Score = 29.1 bits (62), Expect = 4.1
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = +2
Query: 665 GLRSAARVLLKSPVGALSTPAPRTAPCHTPTDAP 766
G R+ A+ L S V + PAP AP P DAP
Sbjct: 34 GKRAVAQPLAASAVTEAAPPAPVVAPPARPVDAP 67
>01_02_0072 + 10828121-10828804,10828912-10828947,10829042-10829833
Length = 503
Score = 29.1 bits (62), Expect = 4.1
Identities = 19/42 (45%), Positives = 21/42 (50%), Gaps = 1/42 (2%)
Frame = +1
Query: 157 PGDTVR-APHPGRHVPRAHAPHPGXECRPAHRGSRSTCSADP 279
PG R AP P RH A APHPG PA + S+DP
Sbjct: 54 PGPAARHAPGPARH-HGAPAPHPGRRSPPAPAPANPP-SSDP 93
>05_07_0146 +
28018236-28018580,28018670-28018777,28018984-28019148,
28019269-28019736,28019823-28019936,28020038-28020715
Length = 625
Score = 28.7 bits (61), Expect = 5.4
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 5/100 (5%)
Frame = -3
Query: 536 HREVRDALVLQP--VRELAEVHAVQRHLEGARLAQHQRLEGLPVGVQRHPARRLLGAPAH 363
HRE + AL + + L+E + +++ ++ L+ V + + R +L AP H
Sbjct: 145 HREAKAALAVTKAEIGRLSEENKRLKNMLSNVTTKYNSLQMQFVTLMQQ-RRSVLAAPIH 203
Query: 362 VAEVVPHDAHLHEAEVEVQRDVVPR--VRVGSA-LQVDRE 252
E++ + E + Q+ ++PR + +GSA LQ D E
Sbjct: 204 QQELLDPEKKEQEGSQQQQQQLIPRQFISLGSASLQPDVE 243
>10_06_0179 - 11508235-11508245,11508555-11508942
Length = 132
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/22 (54%), Positives = 15/22 (68%)
Frame = +2
Query: 698 SPVGALSTPAPRTAPCHTPTDA 763
SPV A S PAP +P +P+DA
Sbjct: 60 SPVTAASPPAPPMSPASSPSDA 81
>10_01_0216 -
2329413-2330419,2331382-2331537,2332363-2332897,
2333026-2333514
Length = 728
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Frame = -1
Query: 502 RCGNSQKCTPFSATLRA-RGSH---STSASKVSPLACSGIPPAVSSAPQLMLLRWFRTTH 335
R G KC T ++ RG+ + + + +ACSG+PP V A ++ L + + T
Sbjct: 410 RIGEGFKCKYCKMTRKSGRGTRLKEHLAGRRHNVIACSGVPPKVRKAMRISLNKVKQRTK 469
Query: 334 ISTKRKLRCSAMSSRGSV 281
+ R+ + +++ V
Sbjct: 470 AAKNRRAKMKKPNTQNMV 487
>09_04_0373 - 17037945-17040641
Length = 898
Score = 28.3 bits (60), Expect = 7.2
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 5/75 (6%)
Frame = -1
Query: 532 VRCEMRWYCSRCGNSQKCT-P--FSATLRARGS--HSTSASKVSPLACSGIPPAVSSAPQ 368
++C YCS GN CT P F+A++ GS ++ SP AC + A
Sbjct: 293 LQCPSLGYCSPAGNGSTCTCPPLFAASVTVAGSCTPGDGSTLASPAACQNNDSSSGGASV 352
Query: 367 LMLLRWFRTTHISTK 323
+ T++ +TK
Sbjct: 353 SYIALKPLTSYFATK 367
>06_03_0969 - 26413534-26413594,26415020-26415318
Length = 119
Score = 28.3 bits (60), Expect = 7.2
Identities = 26/82 (31%), Positives = 34/82 (41%)
Frame = -1
Query: 598 LAGGGGCAPSNPMNCTSTSPSTVRCEMRWYCSRCGNSQKCTPFSATLRARGSHSTSASKV 419
LAGG A +P R RW SR +Q +A R+RG T A +
Sbjct: 19 LAGGDEAAQGSPAAAARRRSRAARATARWR-SRAA-AQGSPAAAARRRSRG---TQARR- 72
Query: 418 SPLACSGIPPAVSSAPQLMLLR 353
P A + PPA++ PQ R
Sbjct: 73 -PPAAARRPPAMARGPQAQARR 93
>06_01_1013 - 7931756-7935109
Length = 1117
Score = 28.3 bits (60), Expect = 7.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +1
Query: 112 NSRKKNKNGSTA-DIQPGDTVRAPHPGRHVPRAHAPHPGXECRPAHRGSR 258
+SR + STA DI P AP P R P +P+P E RP + R
Sbjct: 23 SSRAVWRPRSTAPDIPPPPRAAAPAPDRIGPILPSPNPASEDRPQQQQRR 72
>03_06_0069 - 31449319-31450368
Length = 349
Score = 28.3 bits (60), Expect = 7.2
Identities = 18/57 (31%), Positives = 25/57 (43%)
Frame = +2
Query: 158 PVIPCVHPIPGGMYPGRMLRIQGQSAARRTEVRDQPAVRTQHGPAGRHRAAPQLPLR 328
PV+ + PI P +S+A+ T+ R A + HG AA Q PLR
Sbjct: 16 PVV--LQPIVSNPSPTSSSSTSSRSSAQATQQRSSSATSSPHGQGQGGGAAEQAPLR 70
>01_06_1824 - 40146757-40147648,40150119-40150441
Length = 404
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = +2
Query: 668 LRSAARVLLKSPVGALSTPAPRTAPCHTPTDA 763
L +AAR + SP GA+ PR AP P+ A
Sbjct: 29 LDAAARAIAASPEGAVPVWRPRAAPDEPPSGA 60
>07_03_1116 -
24084162-24084201,24084481-24084570,24084640-24085220,
24085653-24085822,24086006-24087074
Length = 649
Score = 27.9 bits (59), Expect = 9.5
Identities = 18/49 (36%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Frame = +2
Query: 179 PIPGGMYPGRMLRIQGQSAARRTEVRDQPAVRTQHGPAGR-HRAAPQLP 322
P+ G + + R G SAARR A R GPAG R P +P
Sbjct: 460 PLEAGRHNAKKPRTFGNSAARRPPNPVGSAGRRPSGPAGTWQRPPPPMP 508
>05_01_0433 -
3432675-3432922,3433043-3433304,3433413-3433567,
3433720-3433905,3435829-3436132
Length = 384
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/35 (37%), Positives = 19/35 (54%)
Frame = +3
Query: 390 GGMPLHANGETFEALVLCEPRALKVALNGVHFCEF 494
GG P + F LCEP + ++ +GVHF +F
Sbjct: 315 GGPPYNFKPGKFGCDDLCEPGSKVLSWDGVHFTDF 349
>04_04_1211 + 31783076-31783680,31784162-31784427,31784546-31785378
Length = 567
Score = 27.9 bits (59), Expect = 9.5
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 674 SAARVLLKSPVGALSTP--APRTAPCHTPTDAPS 769
+AA V + GAL+ P AP CH P D P+
Sbjct: 67 AAAMVATQGGGGALAAPIQAPDLGDCHQPVDVPA 100
>02_05_1052 +
33770355-33773981,33774217-33774336,33774880-33774996,
33775322-33775411,33775971-33776078,33776304-33776351
Length = 1369
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 1/54 (1%)
Frame = +2
Query: 155 NPVIPCVHPIPG-GMYPGRMLRIQGQSAARRTEVRDQPAVRTQHGPAGRHRAAP 313
+P P HP P G G A R +PA ++ P G AAP
Sbjct: 46 SPATPRRHPSPNAGRSSAAAAEAAGSQARRSQSTERRPATPSRLSPGGSRAAAP 99
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,746,781
Number of Sequences: 37544
Number of extensions: 464962
Number of successful extensions: 2304
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 2142
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2298
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2080154268
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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