Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_O11
(798 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyce... 54 2e-08
SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces pom... 30 0.33
SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme Mms2|Schizos... 28 1.3
SPAC3G6.08 |erv1||sulfhydryl oxidase |Schizosaccharomyces pombe|... 28 1.8
SPAC25B8.04c |||mitochondrial splicing suppressor |Schizosacchar... 27 4.1
SPAC1250.03 |ubc14||ubiquitin conjugating enzyme Ubc14|Schizosac... 26 5.4
SPBC21B10.11 |dpm2||dolichol-phosphate mannosyltransferase subun... 26 7.2
SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr 1... 26 7.2
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 26 7.2
SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces pomb... 25 9.5
SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces po... 25 9.5
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 25 9.5
SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr 1|||... 25 9.5
>SPAC13G6.11c |erg12||mevalonate kinase Erg12 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 404
Score = 54.4 bits (125), Expect = 2e-08
Identities = 48/172 (27%), Positives = 80/172 (46%), Gaps = 3/172 (1%)
Frame = +3
Query: 231 VSAPGKVILHGEHSVVYGKTAIAVSLGLRSSIVIKEVNTPHEPAVHIHLPCV---DLQET 401
VS+PGK IL GEH+VVYG TA+A ++ LRS ++ N V + +LQ
Sbjct: 7 VSSPGKTILFGEHAVVYGATALAAAVSLRSYCKLQTTNNNEIVIVMSDIGTERRWNLQSL 66
Query: 402 IPLEPTVKSLFHPKLAPGITGKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKN 581
TV+++ HP +P L L++ + L N +
Sbjct: 67 PWQHVTVENVQHPASSPN-------------------------LDLLQGLGELLKNEENG 101
Query: 582 SLRSFLYVFSGIFGSTYLPVKSMDISMGSELTIGAGTGSSASFAVCLAGALI 737
+ S + +F S P + +++ S++ +GAG GSSA+ +V +A +L+
Sbjct: 102 LIHSAMLCTLYLFTSLSSPSQGCTLTISSQVPLGAGLGSSATISVVVATSLL 153
>SPBC16A3.02c |||mitochondrial peptidase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 347
Score = 30.3 bits (65), Expect = 0.33
Identities = 17/46 (36%), Positives = 25/46 (54%)
Frame = +3
Query: 639 VKSMDISMGSELTIGAGTGSSASFAVCLAGALIQLLKLKSSSGNFD 776
V+ M + G++L I +G +FAV LA AL + SS+ N D
Sbjct: 158 VRQMKVKPGTKLVIEGASGGVGTFAVALAKALECEVTTISSTENLD 203
>SPCC338.05c |mms2|spm2|ubiquitin conjugating enzyme
Mms2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 139
Score = 28.3 bits (60), Expect = 1.3
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +3
Query: 261 GEHSVVYGKT-AIAVSLGLRSSIVIKEVNTPHEPAVH-IHLPCVDLQETIPLEPTVKSLF 434
GE S YG T A ++L ++ ++ ++ HE ++ + + C P P + +
Sbjct: 22 GESSCSYGLTNADDITLSDWNATILGPAHSVHENRIYSLKIHC---DANYPDAPPIVTFV 78
Query: 435 HPKLAPGITGKFSWRLPHKIDHDYHLRR 518
PG+ G+ PHKID H +R
Sbjct: 79 SRINLPGVDGETGKVNPHKIDCLRHWKR 106
>SPAC3G6.08 |erv1||sulfhydryl oxidase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 182
Score = 27.9 bits (59), Expect = 1.8
Identities = 13/32 (40%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Frame = +3
Query: 528 YLHLIKPNFDSLPN-NQKNSLRSFLYVFSGIF 620
+LH + NF P Q+N + SFLY FS +
Sbjct: 89 FLHAMAANFPKNPTPTQQNDMSSFLYNFSKFY 120
>SPAC25B8.04c |||mitochondrial splicing suppressor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 378
Score = 26.6 bits (56), Expect = 4.1
Identities = 12/33 (36%), Positives = 15/33 (45%)
Frame = -1
Query: 420 LSAPMEWSPVDPRTANVCGLLVRVECLLPLSLW 322
L P+ DPR + L EC LP S+W
Sbjct: 179 LHRPLSAQSTDPRPTRIFVLGATKECSLPPSIW 211
>SPAC1250.03 |ubc14||ubiquitin conjugating enzyme
Ubc14|Schizosaccharomyces pombe|chr 1|||Manual
Length = 155
Score = 26.2 bits (55), Expect = 5.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +3
Query: 462 GKFSWRLPHKIDHDYHLRRVEEYLHLIKPNFDSLPN 569
GKF + L +D+ + +E + PNFDS N
Sbjct: 54 GKFHFSLKFPLDYPFQPPTIEFTTRIYHPNFDSEGN 89
>SPBC21B10.11 |dpm2||dolichol-phosphate mannosyltransferase subunit
2 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 72
Score = 25.8 bits (54), Expect = 7.2
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = +3
Query: 708 FAVCLAGALIQLLKLKSSSGNFD 776
F +CL G + LL +KSS D
Sbjct: 49 FGICLIGTFVSLLMIKSSKKKSD 71
>SPAC11E3.14 |||conserved protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 588
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +3
Query: 483 PHKIDHDYHLRRVEEYLH 536
P IDHD H++R+ E L+
Sbjct: 22 PDPIDHDLHVQRLRELLY 39
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.8 bits (54), Expect = 7.2
Identities = 9/35 (25%), Positives = 18/35 (51%)
Frame = +3
Query: 480 LPHKIDHDYHLRRVEEYLHLIKPNFDSLPNNQKNS 584
L K+ + + ++ L++P+ LPN KN+
Sbjct: 1790 LDQKLSYQFKFENSVKFFRLMQPSLGVLPNTNKNT 1824
>SPCC1450.12 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 821
Score = 25.4 bits (53), Expect = 9.5
Identities = 25/80 (31%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Frame = +3
Query: 297 AVSLGLRSSIVIKEVNTPHEPAVHIHLPCVDLQET---IPLEPTVKSLFHPKLAPGITGK 467
A LG+R S K + T V+ +L V +E I + + S FH L
Sbjct: 171 AYVLGVRQSTQAKMLRTKR---VYEYLIKVSYEENTFFIARKYSDFSHFHHLLLKSYPNA 227
Query: 468 FSWRLPHKIDHDYHLRRVEE 527
+ RLP K DHD +L E+
Sbjct: 228 YVPRLPPKDDHDTYLNSSED 247
>SPCC188.03 |cnd3||condensin subunit Cnd3 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 875
Score = 25.4 bits (53), Expect = 9.5
Identities = 13/38 (34%), Positives = 17/38 (44%)
Frame = +3
Query: 501 DYHLRRVEEYLHLIKPNFDSLPNNQKNSLRSFLYVFSG 614
DY +LHL F+SLPN + R F+ G
Sbjct: 733 DYIALNHNVHLHLANMIFESLPNASEGKERKFMISLLG 770
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +3
Query: 645 SMDISMGSELTIGAGTGSSASFAVCLAGALIQ 740
++ M + A +S SFAVC+A AL+Q
Sbjct: 548 TLSSGMIENAAVAATQNNSDSFAVCVACALVQ 579
>SPAC1A6.03c |||phospholipase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 624
Score = 25.4 bits (53), Expect = 9.5
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 678 IGAGTGSSASFAVCLAGALIQ 740
+ A +S SFAVCLA A+IQ
Sbjct: 531 LSATQNNSDSFAVCLACAMIQ 551
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,612,904
Number of Sequences: 5004
Number of extensions: 82495
Number of successful extensions: 273
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 260
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 273
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 389395636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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