Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O09
         (803 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    26   0.40 
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    26   0.40 
AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    23   2.2  
DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc gr...    23   3.8  
U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.     22   6.6  
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    22   6.6  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           22   6.6  
EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport pe...    21   8.7  
EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport pe...    21   8.7  

>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -3

Query: 177 SLYF*IFGFEFDDCPFCHRFPFVLPLSF-DLNLPIL-VFHNTKQM 49
           SLYF IFG+ +DD         V+P +F D+ LP+L +  NT ++
Sbjct: 256 SLYFCIFGYIYDD-------EMVVPQNFHDIFLPLLCILTNTLEI 293


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 25.8 bits (54), Expect = 0.40
 Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
 Frame = -3

Query: 177 SLYF*IFGFEFDDCPFCHRFPFVLPLSF-DLNLPIL-VFHNTKQM 49
           SLYF IFG+ +DD         V+P +F D+ LP+L +  NT ++
Sbjct: 81  SLYFCIFGYIYDD-------EMVVPQNFHDIFLPLLCILTNTLEI 118


>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 23.4 bits (48), Expect = 2.2
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = -3

Query: 360 RLRS*PTYFQALLLWSVHFQHLILFC 283
           RL++   YF  +  W++ F H+   C
Sbjct: 143 RLKNCVIYFNRIFGWNILFGHIFTVC 168


>DQ659253-1|ABG47451.1|  439|Tribolium castaneum imaginal disc
           growth factor 2 protein.
          Length = 439

 Score = 22.6 bits (46), Expect = 3.8
 Identities = 9/26 (34%), Positives = 17/26 (65%)
 Frame = +3

Query: 576 EYFAALMETLKASELEDNLVATITLL 653
           E F +L+  L+ +   +NL+ T+T+L
Sbjct: 195 EQFVSLVRELRGAFKAENLLVTLTVL 220


>U81040-1|AAB39356.1|  283|Tribolium castaneum TC Deformed protein.
          Length = 283

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = +3

Query: 270 GHKSNKTKSDAENELTIVKELENMSVKTGDEGSESEYSGT 389
           GH+ ++T    ++   +   LE+ +    D+G + + S T
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSST 194


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = +3

Query: 270 GHKSNKTKSDAENELTIVKELENMSVKTGDEGSESEYSGT 389
           GH+ ++T    ++   +   LE+ +    D+G + + S T
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSST 194


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 21.8 bits (44), Expect = 6.6
 Identities = 9/40 (22%), Positives = 20/40 (50%)
 Frame = +3

Query: 270 GHKSNKTKSDAENELTIVKELENMSVKTGDEGSESEYSGT 389
           GH+ ++T    ++   +   LE+ +    D+G + + S T
Sbjct: 155 GHQDSRTSPSGQHLQELGLRLEDANSDEQDDGDDGQGSST 194


>EF222299-1|ABN79659.1|  136|Tribolium castaneum ion transport
           peptide isoform C protein.
          Length = 136

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 570 TTEYFAALMETLKASELE 623
           TT+YF   ++TL+ S+ E
Sbjct: 91  TTDYFKGCIDTLQRSDEE 108


>EF222297-1|ABN79657.1|  140|Tribolium castaneum ion transport
           peptide isoform A protein.
          Length = 140

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 570 TTEYFAALMETLKASELE 623
           TT+YF   ++TL+ S+ E
Sbjct: 91  TTDYFKGCIDTLQRSDEE 108


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 177,890
Number of Sequences: 336
Number of extensions: 3730
Number of successful extensions: 12
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)