Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O09
         (803 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0969 + 33165396-33165935,33166352-33166883,33166988-331672...    34   0.15 
08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,535...    29   3.3  
03_05_0545 + 25419031-25420758                                         29   4.3  
04_04_1144 + 31222556-31222633,31223238-31227665,31227724-312277...    29   5.7  

>02_05_0969 +
           33165396-33165935,33166352-33166883,33166988-33167242,
           33167515-33167606,33167745-33167942,33168049-33168240,
           33168341-33168562,33168858-33169024,33169117-33169210,
           33169308-33169364,33169459-33169587,33169681-33169752,
           33170180-33170293,33170419-33170580,33170666-33170794,
           33171057-33171158,33171266-33171342,33171470-33171592,
           33171666-33172227
          Length = 1272

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 27/106 (25%), Positives = 50/106 (47%), Gaps = 7/106 (6%)
 Frame = +3

Query: 504 KEMLAVLAAVTEVIKEQGGKETTTEYFAALMETL-----KASELEDNLV--ATITLLSMG 662
           + + A  AA+ + +++QG   T   YFAA    L       +   D  V  A +  LS  
Sbjct: 48  QHLCATAAAMAQAVRDQGVAATPVAYFAAAAAALAPLARAGAGAADRHVSGALLAFLSAA 107

Query: 663 IKAVPQAVLRKQFSDSSTTFMELLXKHAQSENGALLRSTIGCLSXL 800
           + A+P AV R +  + +   + +L   +  ++G  +R+ + CL+ L
Sbjct: 108 VPALPPAVARARGREVADDVVRVLEFPSTPDSG--VRAGVRCLAHL 151


>08_01_0609 + 5345761-5345862,5346808-5346871,5346958-5350191,
            5350375-5350589,5351123-5351393,5351986-5352161,
            5352287-5352394,5352821-5352930,5354291-5354393,
            5354658-5354828,5354952-5355080,5355322-5355504,
            5355612-5355701,5355823-5355934,5356100-5356227,
            5357769-5357825,5357872-5357923,5358318-5358393,
            5358860-5358950,5359046-5359224,5359563-5359681,
            5359783-5359880
          Length = 1955

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 23/82 (28%), Positives = 34/82 (41%), Gaps = 1/82 (1%)
 Frame = +3

Query: 69   ILKWVNLDQNL-KAKRRGNDGRKDSHQIRTRKFKNTGRWQNPGFFQENLGSTGLTQQAVS 245
            +L WV  D     A+   N+GR+D H I      N   W      +EN   T L  +   
Sbjct: 1142 VLDWVFADGPPGNARNYDNNGRQDFHAILPNAMTNEEYWVE----EENCIYTRLLHEIRE 1197

Query: 246  KHEAMMTYGHKSNKTKSDAENE 311
            + EA+     K  K KS+ + +
Sbjct: 1198 REEAIKIKVEKRAKMKSEMKEK 1219


>03_05_0545 + 25419031-25420758
          Length = 575

 Score = 29.1 bits (62), Expect = 4.3
 Identities = 14/33 (42%), Positives = 20/33 (60%)
 Frame = +3

Query: 564 ETTTEYFAALMETLKASELEDNLVATITLLSMG 662
           +T +EYF A +E L A       +A +TLLS+G
Sbjct: 133 DTASEYFCASLEGLSAELRLPPAIAGVTLLSLG 165


>04_04_1144 +
           31222556-31222633,31223238-31227665,31227724-31227789,
           31227790-31228014,31228097-31228255,31228393-31228551,
           31228855-31229013,31229371-31229490,31229604-31229825
          Length = 1871

 Score = 28.7 bits (61), Expect = 5.7
 Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 1/135 (0%)
 Frame = +3

Query: 231 QQAVSKHEAMMTYGHKSNKTKSDAENELTIVKELENMSVKTGDEGSESEYSGTLRSGTFK 410
           +QA S HE  +      + +KSDAE   T  ++LEN  + T +E    E    L     K
Sbjct: 573 EQAHSVHERSLELESLLHTSKSDAEVAHTRTQDLEN-ELNTANE-KFKEVEADLEQYRSK 630

Query: 411 TFQTFASDWSQCSNISFHKLLNRFDSNNALHKEMLAVLAAVTEVIKEQGGKETTTEYFAA 590
             Q   SD  +        L    +S +   KE++  L  +TE  K+   +    EY   
Sbjct: 631 VSQ--LSDELEAYQTKAASLEAVMESASEKEKELVESLGQITEEKKKL--ELLVLEYEEK 686

Query: 591 LMETLKASE-LEDNL 632
             E LK  + LE+ L
Sbjct: 687 TEEYLKEKQSLEERL 701


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,633,259
Number of Sequences: 37544
Number of extensions: 377959
Number of successful extensions: 971
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 944
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2185924824
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)