Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O09
         (803 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical ...    72   4e-13
AF038622-1|AAB94152.1|  358|Caenorhabditis elegans Hypothetical ...    31   0.73 
Z81096-4|CAB54264.2|  689|Caenorhabditis elegans Hypothetical pr...    28   6.8  
Z78065-7|CAB54297.2|  689|Caenorhabditis elegans Hypothetical pr...    28   6.8  
U23448-8|AAL27226.1|  849|Caenorhabditis elegans Dnaj domain (pr...    28   6.8  
U13019-5|AAC24444.1|  994|Caenorhabditis elegans Hypothetical pr...    28   9.0  

>AC084156-3|AAK68489.1| 1334|Caenorhabditis elegans Hypothetical
           protein Y46E12BL.2 protein.
          Length = 1334

 Score = 72.1 bits (169), Expect = 4e-13
 Identities = 42/126 (33%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
 Frame = +3

Query: 429 SDWSQCSNISFHKLLNRFDSNNALHKEMLAVLAAVTEVIKEQGGKETTTEYFAALMETLK 608
           S ++ C+N +F  +   + S +++  E+++VLAA+ EVIKE+ GKE+  EY AALM  L+
Sbjct: 95  SGFTACTNPAFDSVNRVWKSGSSIQAEVVSVLAAIAEVIKERDGKESDVEYCAALMTALE 154

Query: 609 ASELED--NLVATITLLSMGIKAVPQAVLRKQFSDSSTTFMELLXKHAQSENGALLRSTI 782
            S L +     A   LL + ++ VP+ VL+ QF          L ++  S  G+ L++ I
Sbjct: 155 GSSLGNPRRTAAIAYLLHLIVRKVPKEVLQAQFHRFVQILYTKLLENVDSTEGSALKNLI 214

Query: 783 GCLSXL 800
             L  +
Sbjct: 215 SVLGII 220


>AF038622-1|AAB94152.1|  358|Caenorhabditis elegans Hypothetical
           protein R07C12.3 protein.
          Length = 358

 Score = 31.5 bits (68), Expect = 0.73
 Identities = 15/48 (31%), Positives = 22/48 (45%)
 Frame = +3

Query: 360 EGSESEYSGTLRSGTFKTFQTFASDWSQCSNISFHKLLNRFDSNNALH 503
           EG+ +   G+L    FKTF     D  Q   I +H  L  F+++   H
Sbjct: 48  EGTFNNLKGSLLMAIFKTFANVRMDTQQADGIIYHHSLQEFNTSVYAH 95


>Z81096-4|CAB54264.2|  689|Caenorhabditis elegans Hypothetical
           protein T09E8.1b protein.
          Length = 689

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 60  CYEILKWVNLDQNLKAKRRGNDGRKDS 140
           C  I+ W+  D+ ++ ++RG+  R+D+
Sbjct: 5   CNSIIGWIKNDKEVRLRKRGDTSRRDA 31


>Z78065-7|CAB54297.2|  689|Caenorhabditis elegans Hypothetical
           protein T09E8.1b protein.
          Length = 689

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 8/27 (29%), Positives = 18/27 (66%)
 Frame = +3

Query: 60  CYEILKWVNLDQNLKAKRRGNDGRKDS 140
           C  I+ W+  D+ ++ ++RG+  R+D+
Sbjct: 5   CNSIIGWIKNDKEVRLRKRGDTSRRDA 31


>U23448-8|AAL27226.1|  849|Caenorhabditis elegans Dnaj domain
           (prokaryotic heat shockprotein) protein 5, isoform b
           protein.
          Length = 849

 Score = 28.3 bits (60), Expect = 6.8
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
 Frame = +3

Query: 63  YEILKWVNLDQNLKAKRRGNDGRK--DSHQIRTRKF 164
           Y+I  W    +N KA+   NDG +    HQI  R++
Sbjct: 811 YDITSWATCKKNKKAELISNDGCRWTKEHQINKRRY 846


>U13019-5|AAC24444.1|  994|Caenorhabditis elegans Hypothetical
           protein T12A2.5 protein.
          Length = 994

 Score = 27.9 bits (59), Expect = 9.0
 Identities = 13/21 (61%), Positives = 16/21 (76%)
 Frame = +3

Query: 570 TTEYFAALMETLKASELEDNL 632
           +TEY  AL++ LKASE  DNL
Sbjct: 923 STEYVDALVDLLKASETFDNL 943


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,519,546
Number of Sequences: 27780
Number of extensions: 357369
Number of successful extensions: 1057
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 977
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1057
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1966828226
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)