Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O08
         (784 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    25   0.90 
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    25   0.90 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.1  
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   4.8  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    22   6.4  

>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 10/51 (19%), Positives = 27/51 (52%)
 Frame = +3

Query: 282 CPLVRQEYCKAGCLCKEGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNP 434
           CP+  + + ++  L K     + +GK  + ++C + E + +++  +N  +P
Sbjct: 377 CPICNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSDSEENSQSDITNNVNSP 427



 Score = 22.6 bits (46), Expect = 3.6
 Identities = 9/44 (20%), Positives = 25/44 (56%)
 Frame = +3

Query: 84  CPLVEEKSCKAGCVCKEGYLKDDSGKCVARENCPNSDLCSENEI 215
           CP+  ++  ++  + K     + +GK  + ++C +S+  S+++I
Sbjct: 377 CPICNKRFMRSDHLAKHVKTHNGNGKKGSSDSCSDSEENSQSDI 420


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 24.6 bits (51), Expect = 0.90
 Identities = 14/46 (30%), Positives = 19/46 (41%)
 Frame = +3

Query: 306 CKAGCLCKEGYLKDDSGKCVARENCPN*ECSGENEEFSNCTNPCPP 443
           C A   C E ++    G C   E+C N EC  +  +      PC P
Sbjct: 528 CTASTRCWEVFM---DGIC--NEDCNNPECLFDGRDCEESLQPCNP 568



 Score = 23.0 bits (47), Expect = 2.8
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = +1

Query: 481 KPKPCEEGCTC 513
           KP PC+ G TC
Sbjct: 227 KPNPCQNGGTC 237


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.4 bits (48), Expect = 2.1
 Identities = 8/21 (38%), Positives = 14/21 (66%)
 Frame = -1

Query: 532 VSSNLVCKCIPLRRVWAYYLI 470
           +  +LV KC  LRR++ +Y +
Sbjct: 42  ILDSLVFKCYNLRRIYYFYCV 62


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 22.2 bits (45), Expect = 4.8
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 740 LFTYDEFYNILEHFYMR 690
           + T D+FYN L H + R
Sbjct: 395 ILTGDQFYNFLNHNFDR 411


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 11/31 (35%), Positives = 18/31 (58%)
 Frame = -2

Query: 582 SHLRTFANLNTGRIVVEFQVIWFASASLFAG 490
           +HL   A+L+ G I V   +IW  + + +AG
Sbjct: 64  THL-ALADLSVGLINVLTDIIWKTTVAWYAG 93


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,538
Number of Sequences: 336
Number of extensions: 4419
Number of successful extensions: 10
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)