BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_O06
(786 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450 pr... 29 0.16
DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfat... 25 2.0
AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450 CY... 25 2.7
EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein. 23 8.1
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 23 8.1
AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprote... 23 8.1
>AY081778-1|AAL91655.1| 507|Anopheles gambiae cytochrome P450
protein.
Length = 507
Score = 29.1 bits (62), Expect = 0.16
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Frame = +3
Query: 117 ADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNA-GKNGGFTRSDMVLSPQDWTSRIVAK 293
A +T T C Y +P I R R + A +NGG DMV++ Q S I
Sbjct: 311 AGSETSSTTMNFCLYELAKNPDIQGRLREEIERAVEENGGEVTYDMVMNVQYLDSVINET 370
Query: 294 LSPYINVDSPS 326
L Y ++S S
Sbjct: 371 LRKYPPIESLS 381
>DQ230893-2|ABD94312.1| 525|Anopheles gambiae iduronate 2-sulfatase
precursor protein.
Length = 525
Score = 25.4 bits (53), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = -3
Query: 457 VWRILAKLLLSLPCIDIMIAGT 392
+WR +LLLSL C+ +I+ T
Sbjct: 1 MWRCKVRLLLSLLCLTFLISTT 22
>AF487537-1|AAL93298.1| 507|Anopheles gambiae cytochrome P450
CYP6P2 protein.
Length = 507
Score = 25.0 bits (52), Expect = 2.7
Identities = 16/51 (31%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Frame = +3
Query: 117 ADLQTCLTEALQCSYSFIVSPIIHPRFRRQSTNA-GKNGGFTRSDMVLSPQ 266
A +T T C Y P I R RR+ A +NGG D+V+ +
Sbjct: 312 AGFETSSTTMNFCLYELAKHPDIQERLRREIERAVEENGGELTYDVVMGTE 362
>EF117201-1|ABL67438.1| 481|Anopheles gambiae serpin 17 protein.
Length = 481
Score = 23.4 bits (48), Expect = 8.1
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = -3
Query: 337 LTVAEGESTLMYGDSLATILLVQS*GDRTISDRVKPPFLPAFVDCLRKRG*IMGETIN 164
++V E +T + SLA + L + I+ V PFL VD + + +G+ +N
Sbjct: 420 ISVDEQGTTAVSAASLAFVALSAAPPPPIINFAVNEPFLMMIVDKIHEYPLFVGKIVN 477
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.4 bits (48), Expect = 8.1
Identities = 11/24 (45%), Positives = 15/24 (62%)
Frame = +3
Query: 609 DWDKRVGVVLELSAXLPSQEVXKR 680
+WD + + E A +PSQEV KR
Sbjct: 445 EWDPSIRI--EPPAAIPSQEVRKR 466
>AF510715-1|AAP47144.1| 470|Anopheles gambiae Rh-like glycoprotein
protein.
Length = 470
Score = 23.4 bits (48), Expect = 8.1
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +1
Query: 496 HVYLCYVVEHIENALKMMKKR-KLGMSPGTGGPNSMSALIGINVLVLFW 639
H + Y + L+ K++ K G G+ + +SA+IG L +FW
Sbjct: 183 HAFGAYFGLAVSFMLRPKKEQAKAGPLEGSSYSSDISAMIGTIFLWIFW 231
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 815,349
Number of Sequences: 2352
Number of extensions: 17205
Number of successful extensions: 44
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 44
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 82328994
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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