Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O01
         (755 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.49 
EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetyla...    22   6.1  
AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase prot...    22   6.1  
AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    21   8.0  
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    21   8.0  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    21   8.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 10/16 (62%), Positives = 10/16 (62%)
 Frame = +3

Query: 9   RFFFESPNDRFRDNTY 56
           RF F  P D FR NTY
Sbjct: 497 RFLFYKPEDIFRPNTY 512


>EU019711-1|ABU25223.1|  534|Tribolium castaneum chitin deacetylase
           1 protein.
          Length = 534

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +2

Query: 62  CDVKNNKCYENPDDNSVVVFVKCF*TQE 145
           CD+ N+     P D +V V   CF +++
Sbjct: 151 CDIDNDPNRAPPCDPAVCVLPDCFCSED 178


>AJ876407-1|CAI45288.1|  590|Tribolium castaneum phosphatase
           protein.
          Length = 590

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)
 Frame = +3

Query: 327 KDFCSNCFKSREEHVKQERVSEGSKYL-ATPFQN 425
           KDFC N  K+ +E +    +    K L A P Q+
Sbjct: 309 KDFCQNLDKAHQESIIMNNILPCVKELVADPNQH 342


>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 554 RPSIASKTNNTTDFIWKTYITFILFL*MD 468
           RPS A+  +N T   W+   TF   L  D
Sbjct: 226 RPSPATIISNVTVISWQAVCTFYNILLCD 254


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 554 RPSIASKTNNTTDFIWKTYITFILFL*MD 468
           RPS A+  +N T   W+   TF   L  D
Sbjct: 226 RPSPATIISNVTVISWQAVCTFYNILLCD 254


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 11/29 (37%), Positives = 14/29 (48%)
 Frame = -1

Query: 554 RPSIASKTNNTTDFIWKTYITFILFL*MD 468
           RPS A+  +N T   W+   TF   L  D
Sbjct: 546 RPSPATIISNVTVISWQAVCTFYNILLCD 574


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,671
Number of Sequences: 336
Number of extensions: 3479
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)