Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O01
         (755 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA...    65   1e-10
BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p pro...    35   0.14 
AJ537449-1|CAD61327.1|  234|Drosophila melanogaster osp-white ch...    35   0.14 
AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB...    35   0.14 
AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA...    35   0.14 

>AE014297-2624|AAF55634.2| 1784|Drosophila melanogaster CG6040-PA
           protein.
          Length = 1784

 Score = 64.9 bits (151), Expect = 1e-10
 Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 34/170 (20%)
 Frame = +3

Query: 288 SPVCHSFVQNAWKKDFCSNCFKSREEH-----VKQERVSEG---SKYLATPFQNR----- 428
           S +C  F QNAWKKD CSNCFKS++EH         ++  G    K + T + N+     
Sbjct: 3   SSICSHFTQNAWKKDLCSNCFKSKDEHKAAAAAAASKMGGGHKPDKEVKTDYPNKHKTPA 62

Query: 429 STFFKK------TPPSILKIHS-----KKKNKRNVS--FPDEVSSVIGFGGDGWSDDEEF 569
            +  KK      T  S     S     K  N + V   FP ++  +IG+GG+ WS+D++ 
Sbjct: 63  KSIIKKAFGVRLTGTSSSSSGSGNGSGKSVNSKGVKVCFPKQLHEIIGYGGE-WSEDDDD 121

Query: 570 E--------MSXXXXXXXXXXXXXXXXXLYRITKSNTDFNTVKANLLGDS 695
           +         +                 L RIT++NTDFN    NLLGD+
Sbjct: 122 DDDHDFMNLGNEHDDMAISETDDEETKELKRITRANTDFNMNNGNLLGDA 171


>BT030131-1|ABN49270.1| 1374|Drosophila melanogaster IP15972p
           protein.
          Length = 1374

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 297 CHSFVQNAWKKDFCSNCFKSREEH 368
           C  F  N + K  CS+CF+ REEH
Sbjct: 39  CRKFTPNIFNKSKCSHCFRQREEH 62


>AJ537449-1|CAD61327.1|  234|Drosophila melanogaster osp-white
           chimeric protein protein.
          Length = 234

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 297 CHSFVQNAWKKDFCSNCFKSREEH 368
           C  F  N + K  CS+CF+ REEH
Sbjct: 39  CRKFTPNIFNKSKCSHCFRQREEH 62


>AE014134-2505|AAN10878.2| 1373|Drosophila melanogaster CG3479-PB,
           isoform B protein.
          Length = 1373

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 297 CHSFVQNAWKKDFCSNCFKSREEH 368
           C  F  N + K  CS+CF+ REEH
Sbjct: 39  CRKFTPNIFNKSKCSHCFRQREEH 62


>AE014134-2504|AAF53402.3| 1553|Drosophila melanogaster CG3479-PA,
           isoform A protein.
          Length = 1553

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 12/24 (50%), Positives = 15/24 (62%)
 Frame = +3

Query: 297 CHSFVQNAWKKDFCSNCFKSREEH 368
           C  F  N + K  CS+CF+ REEH
Sbjct: 39  CRKFTPNIFNKSKCSHCFRQREEH 62


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,211,411
Number of Sequences: 53049
Number of extensions: 620168
Number of successful extensions: 1777
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1774
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3458330568
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)