Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_O01
         (755 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U64857-14|AAL16313.1|  402|Caenorhabditis elegans Hypothetical p...    33   0.17 
U64857-13|AAC25859.2|  436|Caenorhabditis elegans Hypothetical p...    33   0.17 
U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical p...    33   0.17 
Z82089-1|CAB05002.1|  983|Caenorhabditis elegans Hypothetical pr...    28   8.2  
Z81511-2|CAB04167.1|  983|Caenorhabditis elegans Hypothetical pr...    28   8.2  
U41748-2|AAM51524.1|  639|Caenorhabditis elegans Hypothetical pr...    28   8.2  
U41748-1|AAA83335.3|  696|Caenorhabditis elegans Hypothetical pr...    28   8.2  

>U64857-14|AAL16313.1|  402|Caenorhabditis elegans Hypothetical
           protein C37C3.2b protein.
          Length = 402

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
 Frame = +3

Query: 240 KNASYVINRRYSRDKMSPVCHSFVQNAWKKDFCSNCFKS---REEHVKQERVSEGSKYLA 410
           KN  Y++N  +  +K+  +   F++       C N       R+ ++K +  + G  +  
Sbjct: 70  KNERYIVNGEHDANKLQDILDGFIKKFVLCKSCENPETQLFVRKNNIKSKCKACGCSFDI 129

Query: 411 TPFQNRSTFFKKTPPSILKIHSK--KKNKRNVSFPDEVSSV 527
                 STF  K PP I    SK  +KN +  S  D  ++V
Sbjct: 130 DLKHKLSTFIMKNPPKIDVDFSKAEQKNGKKTSGADAAAAV 170


>U64857-13|AAC25859.2|  436|Caenorhabditis elegans Hypothetical
           protein C37C3.2a protein.
          Length = 436

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
 Frame = +3

Query: 240 KNASYVINRRYSRDKMSPVCHSFVQNAWKKDFCSNCFKS---REEHVKQERVSEGSKYLA 410
           KN  Y++N  +  +K+  +   F++       C N       R+ ++K +  + G  +  
Sbjct: 70  KNERYIVNGEHDANKLQDILDGFIKKFVLCKSCENPETQLFVRKNNIKSKCKACGCSFDI 129

Query: 411 TPFQNRSTFFKKTPPSILKIHSK--KKNKRNVSFPDEVSSV 527
                 STF  K PP I    SK  +KN +  S  D  ++V
Sbjct: 130 DLKHKLSTFIMKNPPKIDVDFSKAEQKNGKKTSGADAAAAV 170


>U64857-12|AAN84849.1|  413|Caenorhabditis elegans Hypothetical
           protein C37C3.2c protein.
          Length = 413

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 25/101 (24%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
 Frame = +3

Query: 240 KNASYVINRRYSRDKMSPVCHSFVQNAWKKDFCSNCFKS---REEHVKQERVSEGSKYLA 410
           KN  Y++N  +  +K+  +   F++       C N       R+ ++K +  + G  +  
Sbjct: 70  KNERYIVNGEHDANKLQDILDGFIKKFVLCKSCENPETQLFVRKNNIKSKCKACGCSFDI 129

Query: 411 TPFQNRSTFFKKTPPSILKIHSK--KKNKRNVSFPDEVSSV 527
                 STF  K PP I    SK  +KN +  S  D  ++V
Sbjct: 130 DLKHKLSTFIMKNPPKIDVDFSKAEQKNGKKTSGADAAAAV 170


>Z82089-1|CAB05002.1|  983|Caenorhabditis elegans Hypothetical
           protein ZK270.1 protein.
          Length = 983

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 414 PFQNRSTFFKKTPPSILKIHSKKKNKRNVSFPDEVSSVIGFGGDGWSD 557
           P  + +T F  TP    K+ +  + KR   F  E+ S+ G  G+GW +
Sbjct: 598 PVYSMATVFVNTPG---KLENPARLKRLNEFVREMESINGTWGEGWGE 642


>Z81511-2|CAB04167.1|  983|Caenorhabditis elegans Hypothetical
           protein ZK270.1 protein.
          Length = 983

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = +3

Query: 414 PFQNRSTFFKKTPPSILKIHSKKKNKRNVSFPDEVSSVIGFGGDGWSD 557
           P  + +T F  TP    K+ +  + KR   F  E+ S+ G  G+GW +
Sbjct: 598 PVYSMATVFVNTPG---KLENPARLKRLNEFVREMESINGTWGEGWGE 642


>U41748-2|AAM51524.1|  639|Caenorhabditis elegans Hypothetical
           protein C31H2.1b protein.
          Length = 639

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = +3

Query: 291 PVCHSFVQNAWK-----KDFCSNCFKSREEHVKQERVSEGSK 401
           PVCH    N WK     KD+  +     +E ++ +R+++G K
Sbjct: 159 PVCHEIRANLWKELCNTKDWSGSKRLYSDEAIEYDRINQGKK 200


>U41748-1|AAA83335.3|  696|Caenorhabditis elegans Hypothetical
           protein C31H2.1a protein.
          Length = 696

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 13/42 (30%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
 Frame = +3

Query: 291 PVCHSFVQNAWK-----KDFCSNCFKSREEHVKQERVSEGSK 401
           PVCH    N WK     KD+  +     +E ++ +R+++G K
Sbjct: 216 PVCHEIRANLWKELCNTKDWSGSKRLYSDEAIEYDRINQGKK 257


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,865,904
Number of Sequences: 27780
Number of extensions: 336810
Number of successful extensions: 1103
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1068
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1100
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1798543458
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)