BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_O01
(755 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein. 23 4.1
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 22 7.1
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 22 7.1
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 22 7.1
DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein. 21 9.4
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 21 9.4
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 21 9.4
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 21 9.4
DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex det... 21 9.4
DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex det... 21 9.4
AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex det... 21 9.4
AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex det... 21 9.4
AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex det... 21 9.4
>AB022907-1|BAA86908.1| 615|Apis mellifera glucose oxidase protein.
Length = 615
Score = 22.6 bits (46), Expect = 4.1
Identities = 11/41 (26%), Positives = 20/41 (48%)
Frame = +3
Query: 381 RVSEGSKYLATPFQNRSTFFKKTPPSILKIHSKKKNKRNVS 503
R+S ++ TPF+NRS ++ K+ + K V+
Sbjct: 262 RLSSARAFI-TPFENRSNLHVIVNATVTKVRTLNKRATGVN 301
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDNS 109
TER S++ I + NN Y N ++N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDNS 109
TER S++ I + NN Y N ++N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDNS 109
TER S++ I + NN Y N ++N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDNS 109
TER S++ I + NN Y N ++N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDNS 109
TER S++ I + NN Y N ++N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 21.8 bits (44), Expect = 7.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDNS 109
TER S++ I + NN Y N ++N+
Sbjct: 71 TERERSKEPKIISSLSNNYNYSNYNNNN 98
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 21.8 bits (44), Expect = 7.1
Identities = 8/28 (28%), Positives = 16/28 (57%)
Frame = +3
Query: 15 FFESPNDRFRDNTYQSVMLKITSATKIL 98
+F + ND++ +NT + M + + K L
Sbjct: 83 YFINKNDKYEENTILTTMPLLINVVKYL 110
>DQ435334-1|ABD92649.1| 135|Apis mellifera OBP17 protein.
Length = 135
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/24 (37%), Positives = 15/24 (62%)
Frame = +2
Query: 59 ICDVKNNKCYENPDDNSVVVFVKC 130
I D+ K N DD +V++F++C
Sbjct: 44 IDDINEGKI--NMDDENVLLFIEC 65
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 29 ERPLSRQHVSICDVKNNKCYEN 94
ER S++H I + NN Y N
Sbjct: 72 EREKSKEHKIISSLSNNYNYNN 93
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 29 ERPLSRQHVSICDVKNNKCYEN 94
ER S++H I + NN Y N
Sbjct: 72 EREKSKEHKIISSLSNNYNYNN 93
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 21.4 bits (43), Expect = 9.4
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = +2
Query: 29 ERPLSRQHVSICDVKNNKCYEN 94
ER S++H I + NN Y N
Sbjct: 72 EREKSKEHKIISSLSNNYNYNN 93
>DQ325094-1|ABD14108.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 71 TEREKSKEPKIISSLSNNYNYNNYNNN 97
>DQ325093-1|ABD14107.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 71 TEREKSKEPKIISSLSNNYNYNNYNNN 97
>DQ325092-1|ABD14106.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 71 TEREKSKEPKIISSLSNNYNYNNYNNN 97
>DQ325091-1|ABD14105.1| 175|Apis mellifera complementary sex
determiner protein.
Length = 175
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 71 TEREKSKEPKIISSLSNNYNYNNYNNN 97
>AY569716-1|AAS86669.1| 406|Apis mellifera complementary sex
determiner protein.
Length = 406
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 304 TEREKSKEPKIISSLSNNYNYNNYNNN 330
>AY569710-1|AAS86663.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 304 TEREKSKEPKIISSLSNNYNYNNYNNN 330
>AY569709-1|AAS86662.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 304 TEREKSKEPKIISSLSNNYNYNNYNNN 330
>AY569708-1|AAS86661.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 304 TEREKSKEPKIISSLSNNYNYNNYNNN 330
>AY569707-1|AAS86660.1| 408|Apis mellifera complementary sex
determiner protein.
Length = 408
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 304 TEREKSKEPKIISSLSNNYNYNNYNNN 330
>AY569706-1|AAS86659.1| 397|Apis mellifera complementary sex
determiner protein.
Length = 397
Score = 21.4 bits (43), Expect = 9.4
Identities = 10/27 (37%), Positives = 15/27 (55%)
Frame = +2
Query: 26 TERPLSRQHVSICDVKNNKCYENPDDN 106
TER S++ I + NN Y N ++N
Sbjct: 293 TEREKSKEPKIISSLSNNYNYNNYNNN 319
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,133
Number of Sequences: 438
Number of extensions: 4025
Number of successful extensions: 30
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23753925
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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