Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_N24
         (611 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592539-1|ABQ95985.1|  630|Tribolium castaneum beta-N-acetylglu...    22   4.7  
AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochr...    22   4.7  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   6.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   6.2  
AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment h...    21   8.2  

>EF592539-1|ABQ95985.1|  630|Tribolium castaneum
           beta-N-acetylglucosaminidase FDL protein.
          Length = 630

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 7/19 (36%), Positives = 12/19 (63%)
 Frame = +2

Query: 356 NKQKHALHCQSSPCGRRPP 412
           N++  +L+C   PCG+  P
Sbjct: 353 NERPWSLYCGEPPCGQLNP 371


>AF265297-1|AAG17640.1|  125|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 125

 Score = 21.8 bits (44), Expect = 4.7
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +3

Query: 210 SLQLPHYMSRCISRITRASTSL 275
           SLQ   YM RCI  + R   S+
Sbjct: 40  SLQELKYMERCIKEVLRLYPSV 61


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 157 CKDLHEYLKSRSP 195
           C +LH+ L+SR+P
Sbjct: 240 CNNLHKALESRNP 252


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 6.2
 Identities = 7/13 (53%), Positives = 11/13 (84%)
 Frame = +1

Query: 157 CKDLHEYLKSRSP 195
           C +LH+ L+SR+P
Sbjct: 240 CNNLHKALESRNP 252


>AY695258-1|AAW21975.1|  232|Tribolium castaneum muscle segment
           homeodomain protein protein.
          Length = 232

 Score = 21.0 bits (42), Expect = 8.2
 Identities = 10/20 (50%), Positives = 11/20 (55%)
 Frame = -2

Query: 442 RASSPACPPVWGPPATRRAL 383
           R+SSP      GPP  R AL
Sbjct: 90  RSSSPQTSAPTGPPIVRCAL 109


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 132,626
Number of Sequences: 336
Number of extensions: 2944
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15561709
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)