Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_N14
         (433 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE013599-1545|AAM68636.1|   86|Drosophila melanogaster CG33672-P...    85   3e-17
BT023619-1|AAY85019.1|  140|Drosophila melanogaster IP05796p pro...    38   0.006
AE014297-3592|AAF56322.1|  115|Drosophila melanogaster CG31126-P...    38   0.006
AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA...    28   6.2  

>AE013599-1545|AAM68636.1|   86|Drosophila melanogaster CG33672-PA,
           isoform A protein.
          Length = 86

 Score = 85.4 bits (202), Expect = 3e-17
 Identities = 38/58 (65%), Positives = 46/58 (79%)
 Frame = +3

Query: 108 VTDESDGCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTIHAFTQKTLTVDQWK 281
           VTDESDGCG KFS +IVS  F GK LL +HRLVN+ L EELK IHAF+QK+ T ++W+
Sbjct: 24  VTDESDGCGGKFSAVIVSPAFSGKTLLQKHRLVNSTLAEELKEIHAFSQKSYTPEEWE 81


>BT023619-1|AAY85019.1|  140|Drosophila melanogaster IP05796p
           protein.
          Length = 140

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 141 FSVLIVSDKFKGKPLLARHRLVNTLLQEELKT-----IHAFTQKTLTVDQWKTQ 287
           F V +VS+KF    L+ RHRLVN  ++  LK      +HA + +  T  QW+ +
Sbjct: 72  FRVFVVSEKFNDLTLIKRHRLVNDTVKNALKEAGFEFMHALSIEAKTPKQWEPE 125


>AE014297-3592|AAF56322.1|  115|Drosophila melanogaster CG31126-PA
           protein.
          Length = 115

 Score = 37.9 bits (84), Expect = 0.006
 Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 5/54 (9%)
 Frame = +3

Query: 141 FSVLIVSDKFKGKPLLARHRLVNTLLQEELKT-----IHAFTQKTLTVDQWKTQ 287
           F V +VS+KF    L+ RHRLVN  ++  LK      +HA + +  T  QW+ +
Sbjct: 47  FRVFVVSEKFNDLTLIKRHRLVNDTVKNALKEAGFEFMHALSIEAKTPKQWEPE 100


>AE014297-1933|AAF55130.1|  537|Drosophila melanogaster CG3984-PA
           protein.
          Length = 537

 Score = 27.9 bits (59), Expect = 6.2
 Identities = 13/35 (37%), Positives = 20/35 (57%)
 Frame = -1

Query: 250 VNAWIVFXXXXSNVFTNLCLARRGFPLNLSDTMRT 146
           VNA+IV      N+++NLC  + G   N S+ + T
Sbjct: 40  VNAYIVCSPIILNMYSNLCGGQTGIQCNPSNPVTT 74


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,797,975
Number of Sequences: 53049
Number of extensions: 248105
Number of successful extensions: 659
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 641
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 659
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1355285490
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)