Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_N14
         (433 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-10|CAC48129.1|  106|Caenorhabditis elegans Hypothetical...    56   8e-09
Z81120-6|CAH10814.1|   98|Caenorhabditis elegans Hypothetical pr...    52   2e-07
U88168-2|AAC24398.1|  108|Caenorhabditis elegans Hypothetical pr...    49   1e-06
U80444-7|AAO12447.1|  380|Caenorhabditis elegans Hypothetical pr...    28   2.5  
U80444-5|AAB37791.1|  397|Caenorhabditis elegans Hypothetical pr...    28   2.5  
Z68751-4|CAA92974.1|  425|Caenorhabditis elegans Hypothetical pr...    27   4.4  
Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical pr...    27   7.7  

>AL132876-10|CAC48129.1|  106|Caenorhabditis elegans Hypothetical
           protein Y105E8A.11 protein.
          Length = 106

 Score = 56.4 bits (130), Expect = 8e-09
 Identities = 24/56 (42%), Positives = 39/56 (69%)
 Frame = +3

Query: 93  CSIEEVTDESDGCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTIHAFTQKT 260
           C+  EV D S+GCG+ F V++ +  FKGK  +A+H+ V ++L+E++K +H  T KT
Sbjct: 48  CTRVEVHDVSNGCGSMFDVVVEAAGFKGKSKVAQHKQVTSILREQIKDMHGLTIKT 103


>Z81120-6|CAH10814.1|   98|Caenorhabditis elegans Hypothetical
           protein T12D8.10 protein.
          Length = 98

 Score = 52.0 bits (119), Expect = 2e-07
 Identities = 29/64 (45%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
 Frame = +3

Query: 90  KCSIEEVTDESDGC-GAKFSVLIVSDKFKGKPLLARHRLVNTLLQEELKTIHAFTQKTLT 266
           K  I +V DES GC G KF +LIVS+ F+GK  L  HRLV   L   +   HA T    T
Sbjct: 17  KPQILKVVDESGGCDGYKFRLLIVSEAFEGKCTLQSHRLVQAALAPIMDETHALTICAYT 76

Query: 267 VDQW 278
            ++W
Sbjct: 77  PERW 80


>U88168-2|AAC24398.1|  108|Caenorhabditis elegans Hypothetical
           protein K11H12.1 protein.
          Length = 108

 Score = 49.2 bits (112), Expect = 1e-06
 Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +3

Query: 126 GCGAKFSVLIVSDKFKGKPLLARHRLVNTLLQEEL-KTIHAFTQKTLTVDQWKTQ 287
           G    F V +VSD+F+GK ++ RHRLVNT L +EL  T+HA     +   +W  Q
Sbjct: 40  GAEKHFRVQVVSDEFEGKRVIERHRLVNTCLAKELATTVHALRIDAIPTSKWDGQ 94


>U80444-7|AAO12447.1|  380|Caenorhabditis elegans Hypothetical
           protein F26B1.2c protein.
          Length = 380

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 248 ERVDCLQFLLKQCVHQSMPGKKRF 177
           +++   Q+LL+QCV  S  G++RF
Sbjct: 353 QQIHSAQYLLQQCVRNSTQGRERF 376


>U80444-5|AAB37791.1|  397|Caenorhabditis elegans Hypothetical
           protein F26B1.2a protein.
          Length = 397

 Score = 28.3 bits (60), Expect = 2.5
 Identities = 10/24 (41%), Positives = 17/24 (70%)
 Frame = -3

Query: 248 ERVDCLQFLLKQCVHQSMPGKKRF 177
           +++   Q+LL+QCV  S  G++RF
Sbjct: 370 QQIHSAQYLLQQCVRNSTQGRERF 393


>Z68751-4|CAA92974.1|  425|Caenorhabditis elegans Hypothetical
           protein T05E11.4 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 4.4
 Identities = 16/59 (27%), Positives = 26/59 (44%)
 Frame = -3

Query: 260 GFLGERVDCLQFLLKQCVHQSMPGKKRFPFELVRYYENRKLGAASVALICHLLNRALSN 84
           G L   + CL  +     +     K+   +E    Y N+K   +S+  IC LLN + +N
Sbjct: 90  GKLDRDLHCLHQVYDLLENDKRSTKRELYYEHKAVYGNQKYLDSSIKSICELLNESRAN 148


>Z81037-3|CAB02750.1|  205|Caenorhabditis elegans Hypothetical
           protein C17E4.5 protein.
          Length = 205

 Score = 26.6 bits (56), Expect = 7.7
 Identities = 11/27 (40%), Positives = 14/27 (51%)
 Frame = +3

Query: 102 EEVTDESDGCGAKFSVLIVSDKFKGKP 182
           EE+     GCG+   V I  D+F G P
Sbjct: 92  EEIEQHFHGCGSVSRVTIQCDRFSGHP 118


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,080,880
Number of Sequences: 27780
Number of extensions: 128035
Number of successful extensions: 246
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 241
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 246
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 724655464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)