Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_N12
(764 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1 ... 183 2e-47
SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr 1|||M... 27 3.9
SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein At... 26 5.1
SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase |S... 26 5.1
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 26 6.8
SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit Bgs3|Schizo... 26 6.8
SPBC16G5.15c |fkh2||fork head transcription factor Fkh2 |Schizos... 25 9.0
SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 25 9.0
SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces p... 25 9.0
>SPBC1198.14c |fbp1|SPBC660.04c|fructose-1,6-bisphosphatase Fbp1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 347
Score = 183 bits (446), Expect = 2e-47
Identities = 95/192 (49%), Positives = 130/192 (67%)
Frame = +3
Query: 189 ATGDLTQLLNSIQTAVKAIQSAVRKAGIAKLHGISGDTNVQGEEVKKLDVLSNDLFINML 368
A+G+L+ LLNS+Q + K I + +RKA + L G+SG N G+E KKLD + ND+FI +
Sbjct: 43 ASGELSLLLNSLQFSFKFIANTIRKAELVNLIGLSGIVNSTGDEQKKLDKICNDIFITAM 102
Query: 369 KSSFTTCLLVSEENQTVLQVETERRGKYVVCFDPLDGSSNIECLVSVGSIFAIYKKKSEG 548
KS+ L+VSEE + ++ V++ G Y V DP+DGSSNI+ VSVG+IF IYK +
Sbjct: 103 KSNGCCKLIVSEEEEDLIVVDSN--GSYAVTCDPIDGSSNIDAGVSVGTIFGIYKLRPGS 160
Query: 549 DPVESDALKPGRELVAAGYALYGSATMMVLSLGKGKGVNGFMYDPSIGEFILTDPNMKIP 728
SD L+PG+E+VAAGY +YG++ ++L+ G VNGF D IGEFILT NMK+P
Sbjct: 161 QGDISDVLRPGKEMVAAGYTMYGASAHLLLT--TGHRVNGFTLDTDIGEFILTHRNMKMP 218
Query: 729 XKGKIYSINEGY 764
+ IYSINEGY
Sbjct: 219 LQHSIYSINEGY 230
>SPAC22G7.04 |ubp13|pan2|poly|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1115
Score = 26.6 bits (56), Expect = 3.9
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = -2
Query: 673 MKPFTPLPFPSDKTIMVAEPYKA*PAATSSLPG-FNASDSTGSPSD 539
+ P+PFP+ TI+ P + A S G F+ D TG+P D
Sbjct: 246 LSSLVPIPFPAGPTIIRMHPKLSTTAVVCSCSGQFHIVD-TGNPLD 290
>SPAC4F10.07c |atg13|apg13, mug78|autophagy associated protein Atg13
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 758
Score = 26.2 bits (55), Expect = 5.1
Identities = 14/39 (35%), Positives = 20/39 (51%)
Frame = -2
Query: 454 TYLPLRSVSTCKTVWFSSDTRRHVVNEDLSMLMKRSLER 338
TYL + +S +T+ S T H +N + MK LER
Sbjct: 113 TYLDISDLSKNQTLSVSDGTHSHAINFNNMSTMKIVLER 151
>SPCC1235.15 |dga1|SPCC548.01|diacylglycerol O-acyltransferase
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 345
Score = 26.2 bits (55), Expect = 5.1
Identities = 13/35 (37%), Positives = 16/35 (45%)
Frame = +2
Query: 608 LVWFCYHDGLVAGKGQGRERLHVRPFDRRVHSYRP 712
L+W Y DG V GK + + L P R Y P
Sbjct: 65 LIWLIYDDGFVTGKDRQKRWLRNAPPYRWFCHYFP 99
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 25.8 bits (54), Expect = 6.8
Identities = 20/77 (25%), Positives = 30/77 (38%)
Frame = -2
Query: 658 PLPFPSDKTIMVAEPYKA*PAATSSLPGFNASDSTGSPSDFFL*IAKIDPTDTRHSMLEE 479
P+P P+ K V P P+ ++ + S SPS +A P R S+
Sbjct: 1228 PVPVPTAKAPPVPAPSSEAPSVSTPRSSVPSPHSNASPSPTSSSMASAAP--ARTSVSRS 1285
Query: 478 PSRGSKHTTYLPLRSVS 428
S+ +H T R S
Sbjct: 1286 KSKAERHETSTSSRKSS 1302
>SPAC19B12.03 |bgs3||1,3-beta-glucan synthase subunit
Bgs3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1826
Score = 25.8 bits (54), Expect = 6.8
Identities = 12/39 (30%), Positives = 22/39 (56%)
Frame = -2
Query: 520 KIDPTDTRHSMLEEPSRGSKHTTYLPLRSVSTCKTVWFS 404
K+D D + +L SR +T +P + +S+C+ +W S
Sbjct: 227 KMDQFDLKSGVLSFISRDP--STQVPYKDMSSCEALWIS 263
>SPBC16G5.15c |fkh2||fork head transcription factor Fkh2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 642
Score = 25.4 bits (53), Expect = 9.0
Identities = 17/48 (35%), Positives = 21/48 (43%)
Frame = -2
Query: 685 EGSYMKPFTPLPFPSDKTIMVAEPYKA*PAATSSLPGFNASDSTGSPS 542
EGS P LP D +I AEP + +A P + GSPS
Sbjct: 332 EGSPSLPIPILPKMKDTSIPAAEPASSTTSARDQTP--STPKDVGSPS 377
>SPCC622.15c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 557
Score = 25.4 bits (53), Expect = 9.0
Identities = 10/18 (55%), Positives = 12/18 (66%)
Frame = -2
Query: 703 RMNSPIEGSYMKPFTPLP 650
+MN P G Y PF+PLP
Sbjct: 291 KMNVPPMGMYPLPFSPLP 308
>SPAC607.10 |spo3||sporulation protein Spo3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1028
Score = 25.4 bits (53), Expect = 9.0
Identities = 15/55 (27%), Positives = 26/55 (47%)
Frame = -2
Query: 703 RMNSPIEGSYMKPFTPLPFPSDKTIMVAEPYKA*PAATSSLPGFNASDSTGSPSD 539
+ N+P S +P TPL P +T+ P+ T + P F+++ S S +
Sbjct: 44 KQNTPSPNSECRPLTPLNSPFRRTVEGDTANLQAPSPT-ACPSFDSASSIKSSKE 97
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,244,766
Number of Sequences: 5004
Number of extensions: 70715
Number of successful extensions: 210
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 208
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 367316502
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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