Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_N12
         (764 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            25   2.6  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            25   2.6  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    25   2.6  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    24   4.5  
AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450 pr...    24   5.9  
M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.           23   7.8  
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.            23   7.8  
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.            23   7.8  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 672  MYDPSIGEFILTDPNMKIP 728
            +YDP IG F   DP  + P
Sbjct: 2688 LYDPDIGRFYQMDPKEQYP 2706


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 672  MYDPSIGEFILTDPNMKIP 728
            +YDP IG F   DP  + P
Sbjct: 2698 LYDPDIGRFYQMDPKEQYP 2716


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
          Length = 2051

 Score = 25.0 bits (52), Expect = 2.6
 Identities = 11/44 (25%), Positives = 19/44 (43%)
 Frame = +2

Query: 77   FYFTNIIKDNDTARAGFRCQRYDVDTVGSRAAEDGAYCHRGPDS 208
            +YF N+I + +  R  +     D D   S ++E  +      DS
Sbjct: 1895 YYFGNVISEQEAGRQRYNYYYKDFDLSDSSSSESSSSSDESDDS 1938


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 24.2 bits (50), Expect = 4.5
 Identities = 12/40 (30%), Positives = 24/40 (60%)
 Frame = +3

Query: 213  LNSIQTAVKAIQSAVRKAGIAKLHGISGDTNVQGEEVKKL 332
            +NS++  V+A QSA+RK    +   +  + N   EE++++
Sbjct: 937  INSMEDEVEAAQSAIRKGNDERTQ-LEEEANKLREELEEM 975


>AY028786-1|AAK32960.1|  501|Anopheles gambiae cytochrome P450
           protein.
          Length = 501

 Score = 23.8 bits (49), Expect = 5.9
 Identities = 13/33 (39%), Positives = 17/33 (51%)
 Frame = +3

Query: 138 AMTLTRWVLAQQRTAPTATGDLTQLLNSIQTAV 236
           AM  TRW   + +  PT T    +L+ S  TAV
Sbjct: 118 AMEGTRWKNLRAKLTPTFTSGKMKLMFSTVTAV 150


>M93690-2|AAA29363.1| 1212|Anopheles gambiae unknown protein.
          Length = 1212

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 14/51 (27%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
 Frame = -2

Query: 163  RTHRVNVIALTSKAGPCCVIVLDNIREIK*YNDP-RTFREMSARNT*RHET 14
            RT R     L +   P C+++ ++ R  +  NDP R+  + + R   R  T
Sbjct: 890  RTVRYETATLLAGLTPICLLIEEDARVFERVNDPGRSITKAAIRLEERQRT 940


>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
          Length = 3320

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 672  MYDPSIGEFILTDP 713
            +YDP +G F+  DP
Sbjct: 2648 LYDPELGRFLQLDP 2661


>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
          Length = 3318

 Score = 23.4 bits (48), Expect = 7.8
 Identities = 7/14 (50%), Positives = 10/14 (71%)
 Frame = +3

Query: 672  MYDPSIGEFILTDP 713
            +YDP +G F+  DP
Sbjct: 2649 LYDPELGRFLQLDP 2662


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,089
Number of Sequences: 2352
Number of extensions: 18166
Number of successful extensions: 34
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)