Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_N06
(523 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical ... 77 6e-15
U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical pr... 75 3e-14
Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical pr... 32 0.29
Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical p... 32 0.29
U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical pr... 29 2.7
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr... 28 4.7
Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical p... 27 8.1
Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical pr... 27 8.1
AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic catio... 27 8.1
AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical ... 27 8.1
AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical ... 27 8.1
>AL132865-1|CAB60595.1| 110|Caenorhabditis elegans Hypothetical
protein Y62E10A.1 protein.
Length = 110
Score = 77.4 bits (182), Expect = 6e-15
Identities = 47/112 (41%), Positives = 56/112 (50%)
Frame = +1
Query: 88 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRX 267
MRYV+AYLLAVLGG P D++ ILS+VG++ADAE K V++ L GK VE+LIA G
Sbjct: 1 MRYVSAYLLAVLGGNANPKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSA 60
Query: 268 KLSSMPVGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGFGLFD 423
L S V GG MGFGLFD
Sbjct: 61 GLVS--VSGGAAPAAAAAPAAGGAAPAADSKPAKKEEPKEESDDDMGFGLFD 110
>U97194-7|AAB52450.2| 107|Caenorhabditis elegans Hypothetical
protein C37A2.7 protein.
Length = 107
Score = 74.9 bits (176), Expect = 3e-14
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +1
Query: 88 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRX 267
M+Y+ AYLLA LGG +P+A DV K+L + G++ D E V+ L GK + ++IA G+
Sbjct: 1 MKYLGAYLLATLGGNASPSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKV 60
Query: 268 KLSSMPVGG 294
KLSS+P GG
Sbjct: 61 KLSSVPSGG 69
>Z70752-5|CAA94758.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 133 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 252
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>Z70750-16|CAA94750.1| 901|Caenorhabditis elegans Hypothetical
protein F25B3.1 protein.
Length = 901
Score = 31.9 bits (69), Expect = 0.29
Identities = 16/41 (39%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Frame = +1
Query: 133 TTPAAADVEKILSSVGIEADAEKLKKVITEL-NGKDVEQLI 252
+TPA+A +I + GI EK+ +ITE+ N KD+E+ +
Sbjct: 444 STPASASDHRISRTFGINESEEKVVAMITEIRNQKDLEEAV 484
>U53153-9|AAC69041.1| 511|Caenorhabditis elegans Hypothetical
protein T19A5.5 protein.
Length = 511
Score = 28.7 bits (61), Expect = 2.7
Identities = 12/35 (34%), Positives = 15/35 (42%)
Frame = +2
Query: 17 C*RLFKTNVILSALHVSCQLGLKKCVTWPRIYWLC 121
C F+ + H CQ G +CV PR W C
Sbjct: 41 CAAFFRRVFVTHKQHFKCQTGQNQCVPDPRGRWNC 75
>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
K10C2.1 protein.
Length = 2314
Score = 27.9 bits (59), Expect = 4.7
Identities = 22/75 (29%), Positives = 36/75 (48%)
Frame = -3
Query: 296 PPPTGIDDSXSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPST 117
P PT P +++ T+ P ++T + S S PT + ST+ AA V+ T
Sbjct: 2240 PSPTNQSPVTLPPPSVA--TAGPTGPILTVVPVS---SAPTSGAVSSTATAAPVITTTKT 2294
Query: 116 ASKYAAT*RIF*VLI 72
+S + + +F VLI
Sbjct: 2295 SSVLSVSFSMFIVLI 2309
>Z83228-10|CAB05732.2| 585|Caenorhabditis elegans Hypothetical
protein F52F12.1a protein.
Length = 585
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +1
Query: 172 SVGIEADAEKLKKVITELNGK---DVEQLI 252
SVG ADA+K K I ++NGK DV++L+
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 326
>Z83228-1|CAC70093.1| 568|Caenorhabditis elegans Hypothetical
protein F52F12.1b protein.
Length = 568
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +1
Query: 172 SVGIEADAEKLKKVITELNGK---DVEQLI 252
SVG ADA+K K I ++NGK DV++L+
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 309
>AF110415-1|AAF21932.1| 568|Caenorhabditis elegans organic cation
transporter 1 protein.
Length = 568
Score = 27.1 bits (57), Expect = 8.1
Identities = 15/30 (50%), Positives = 21/30 (70%), Gaps = 3/30 (10%)
Frame = +1
Query: 172 SVGIEADAEKLKKVITELNGK---DVEQLI 252
SVG ADA+K K I ++NGK DV++L+
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELV 309
>AF106589-3|AAT81179.1| 511|Caenorhabditis elegans Hypothetical
protein Y44E3A.4 protein.
Length = 511
Score = 27.1 bits (57), Expect = 8.1
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = -3
Query: 248 SCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTASKYA 102
S ST P+S+ + + + SIP+ S+ + + PPS+ASK A
Sbjct: 436 SISTVNPMSASMFVPATAKEISIPSNSSATSSPFKSSSIAPPSSASKPA 484
>AC024882-7|AAF60924.1| 285|Caenorhabditis elegans Hypothetical
protein Y9C9A.12 protein.
Length = 285
Score = 27.1 bits (57), Expect = 8.1
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 51 RHYTFRVN*DLKNALRGRVFTGCAGWQDHASC 146
+H+T R++ D+KN R + FT + SC
Sbjct: 98 KHFTIRISDDIKNKNRDQCFTRILNTLNSKSC 129
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,557,498
Number of Sequences: 27780
Number of extensions: 125738
Number of successful extensions: 412
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 406
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 412
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1017709248
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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