Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_N02
         (673 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR prot...    26   0.94 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    26   1.2  
AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione S-tran...    24   3.8  

>AY391746-1|AAR28996.1|  502|Anopheles gambiae putative GPCR
           protein.
          Length = 502

 Score = 26.2 bits (55), Expect = 0.94
 Identities = 20/70 (28%), Positives = 28/70 (40%), Gaps = 4/70 (5%)
 Frame = -1

Query: 328 VQKIQCYEFDK--KHQFQHLRQRVRALETHVCL--PCYAIQANNYGLDHHNNMMIITQYS 161
           VQ+IQ Y   +    Q +  +  +      VCL  P Y ++   Y    H NM I    +
Sbjct: 353 VQQIQLYSRSRVANSQIKVTKMLLIVSTVFVCLNLPSYIVRVKIYLETEHTNMNIYLVQN 412

Query: 160 MCQQASPTGF 131
            CQ    T F
Sbjct: 413 CCQLFFMTNF 422


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 25.8 bits (54), Expect = 1.2
 Identities = 11/23 (47%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -1

Query: 253 ETHVCLPCYAIQANNYGL--DHH 191
           ET +CLPC+      +GL  DHH
Sbjct: 681 ETRICLPCHQECRGCHGLGDDHH 703


>AF513639-1|AAM53611.1|  195|Anopheles gambiae glutathione
           S-transferase S1-2 protein.
          Length = 195

 Score = 24.2 bits (50), Expect = 3.8
 Identities = 10/27 (37%), Positives = 18/27 (66%)
 Frame = +3

Query: 438 YVDIFKTAVLNYVN*EGKNSLITSAYN 518
           + DI+ TA+L+Y+N   K+ L+ +  N
Sbjct: 143 WADIYFTAILDYLNYMTKSDLVANHPN 169


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 677,444
Number of Sequences: 2352
Number of extensions: 13413
Number of successful extensions: 17
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 67322955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)