Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_M22
(670 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces pombe... 46 7e-06
SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein Pss1|Sch... 43 5e-05
SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces ... 37 0.003
SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyce... 36 0.004
SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces p... 36 0.004
SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyc... 31 0.20
SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr 1|||M... 30 0.26
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 27 1.8
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 27 2.4
SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr ... 27 3.2
SPAC664.01c |swi6|SPAC824.10c|chromodomain protein Swi6|Schizosa... 26 4.3
SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces p... 26 4.3
SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces ... 26 4.3
SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces ... 26 4.3
SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr... 26 4.3
SPAC1952.17c ||SPAC890.01c|GTPase activating protein|Schizosacch... 26 5.6
SPAPB1A10.09 |ase1||microtubule-associated protein Ase1 |Schizos... 25 7.5
SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4 |Schizosacc... 25 9.9
SPCC737.06c |||glutamate-cysteine ligase regulatory subunit |Sch... 25 9.9
>SPAC1F5.06 |||heat shock protein Lhs1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 848
Score = 45.6 bits (103), Expect = 7e-06
Identities = 28/103 (27%), Positives = 50/103 (48%), Gaps = 1/103 (0%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEP-ARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+++ GG SR+P + ++++NADEA+ GA + ASL ++V PL V+D
Sbjct: 368 IILFGGASRIPFIQSTLADYVSSDKISKNVNADEASVKGAAFYGASLTKSFRVKPLIVQD 427
Query: 185 AVLLPIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFNKH 313
+ P ++ ++ + L T +G + V T KH
Sbjct: 428 IINYP-YLLSLGTSEYIVALPDSTPYGMQHNVTIHNVSTIGKH 469
>SPAC110.04c |pss1|ssp1, SPAP14E8.01c|heat shock protein
Pss1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 42.7 bits (96), Expect = 5e-05
Identities = 30/132 (22%), Positives = 54/132 (40%)
Frame = +2
Query: 14 VAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLATGYKVAPLNVRDAVL 193
+ GG +RVP + ++N DEA G A L+ ++V +V D
Sbjct: 342 MVGGCTRVPIVKEVIANYFGKGLSFTLNQDEAVARGCALSCAILSPVFRVREFHVHDVTT 401
Query: 194 LPIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTEDFSFNVNYAELDHIPSTE 373
PI + + ++ +F NP P K++TF + F Y++ +P +
Sbjct: 402 YPITFSWEPIPENPEEDSSLEVFSEGNPIPSTKILTFYRKA-PFKLLAAYSKEAQLPGSI 460
Query: 374 LQYIGALNLSEV 409
Q I +++V
Sbjct: 461 KQNIAQYLINDV 472
>SPAC13G7.02c |ssa1||heat shock protein Ssa1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 644
Score = 36.7 bits (81), Expect = 0.003
Identities = 56/200 (28%), Positives = 86/200 (43%), Gaps = 7/200 (3%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLA--TGYKVAPLNV 178
+V+ GG +R+P EP +SIN DEA GA +AA L T K L +
Sbjct: 332 IVLVGGSTRIPRIQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAILVGDTSEKTQDLLL 391
Query: 179 RDAVLLPIQVVFTRHADGV-DKLVKRTLFGPMNPYPQKKVITFNKHTEDF-SFNVNYAEL 352
D L + + A GV L+KR P KK F+ + ++ + E
Sbjct: 392 LDVAPLSLGI---ETAGGVMTPLIKRN-----TTIPTKKSEVFSTYADNQPGVLIQVFEG 443
Query: 353 DHIPSTELQYIGALNLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEF 532
+ + + +G + LSG+ A + V + I+ F++D +GILN+ +E
Sbjct: 444 ERARTKDCNLLG-----KFELSGIPPA-PRGVPQ------IEVTFDVDANGILNVSALEK 491
Query: 533 VAEKT--VTEDEDKDSTLSK 586
KT +T DK LSK
Sbjct: 492 GTGKTQKITITNDK-GRLSK 510
>SPAC664.11 |ssc1|ssp1|Hsp70 chaperone mtHsp70|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 674
Score = 36.3 bits (80), Expect = 0.004
Identities = 20/65 (30%), Positives = 34/65 (52%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLATGYKVAPLNVRDA 187
+++ GG +R+P + EPA+S+N DEA +GA + L+ +V+D
Sbjct: 380 VILVGGMTRMPRVVETVKSIFKREPAKSVNPDEAVAIGAAIQGGVLSG-------HVKDL 432
Query: 188 VLLPI 202
VLL +
Sbjct: 433 VLLDV 437
>SPCC1739.13 |ssa2||heat shock protein Ssa2|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 647
Score = 36.3 bits (80), Expect = 0.004
Identities = 53/199 (26%), Positives = 86/199 (43%), Gaps = 6/199 (3%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLA--TGYKVAPLNV 178
+V+ GG +R+P EP +SIN DEA GA +AA L T K L +
Sbjct: 332 IVLVGGSTRIPRVQKLVSDFFNGKEPCKSINPDEAVAYGAAVQAAVLTGDTSEKTQDLLL 391
Query: 179 RDAVLLPIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTEDF-SFNVNYAELD 355
D + P+ + + L+KR P KK F+ ++++ + E +
Sbjct: 392 LD--VAPLSMGIETAGGVMTPLIKRN-----TTIPTKKSEIFSTYSDNQPGVLIQVFEGE 444
Query: 356 HIPSTELQYIGALNLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
+ + +G + LSG+ A + V + I+ F++D +GILN+ +E
Sbjct: 445 RARTKDCNLLG-----KFELSGIPPA-PRGVPQ------IEVTFDVDANGILNVSALEKG 492
Query: 536 AEKT--VTEDEDKDSTLSK 586
KT +T DK LSK
Sbjct: 493 TGKTQKITITNDK-GRLSK 510
>SPBC1709.05 |sks2|hsc1|heat shock protein Sks2|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 613
Score = 30.7 bits (66), Expect = 0.20
Identities = 25/80 (31%), Positives = 34/80 (42%), Gaps = 4/80 (5%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPA-RSINADEAATLGAVYRAASL---ATGYKVAPLN 175
+V+ GG +R+P +SIN DEA GA +AA L A K L
Sbjct: 336 IVLVGGSTRIPKVQRLVSDFFDGRALNKSINPDEAVAYGAAVQAAVLTNKADSDKTQDLL 395
Query: 176 VRDAVLLPIQVVFTRHADGV 235
+ D V L + V + GV
Sbjct: 396 LLDVVPLSLGVAMEGNVFGV 415
>SPAC22A12.15c |bip1|bip|BiP |Schizosaccharomyces pombe|chr
1|||Manual
Length = 663
Score = 30.3 bits (65), Expect = 0.26
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLA 148
+V+ GG +R+P + ++ IN DEA GA +A L+
Sbjct: 364 IVLVGGSTRIPKVQELLESFFGKKASKGINPDEAVAYGAAVQAGVLS 410
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 27.5 bits (58), Expect = 1.8
Identities = 11/34 (32%), Positives = 17/34 (50%)
Frame = +2
Query: 488 NMDDSGILNLVNVEFVAEKTVTEDEDKDSTLSKI 589
N D GI L+N+ FV+ D++K L +
Sbjct: 486 NNSDKGISELINIPFVSANNSMADDEKGRNLKNL 519
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 27.1 bits (57), Expect = 2.4
Identities = 12/47 (25%), Positives = 24/47 (51%)
Frame = +2
Query: 389 ALNLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVE 529
+LN + L + L K+ + ++ +GIK+ + S +LN + E
Sbjct: 1186 SLNADNLDLKDTNGVLEKNASDFIDFQGIKSRYEHKISDLLNQLQKE 1232
>SPBC16H5.13 |||WD repeat protein |Schizosaccharomyces pombe|chr
2|||Manual
Length = 1026
Score = 26.6 bits (56), Expect = 3.2
Identities = 17/49 (34%), Positives = 25/49 (51%)
Frame = +2
Query: 278 YPQKKVITFNKHTEDFSFNVNYAELDHIPSTELQYIGALNLSEVSLSGV 424
YP+K ITFN TE + N +L + + Y +LNL + SG+
Sbjct: 303 YPEK--ITFNWLTEGTVDSCNLCKLSNTAAVSYAYTDSLNLFLGTTSGL 349
>SPAC664.01c |swi6|SPAC824.10c|chromodomain protein
Swi6|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 26.2 bits (55), Expect = 4.3
Identities = 10/37 (27%), Positives = 17/37 (45%)
Frame = -1
Query: 298 DHLLLWVGVHRPKESSLNQLVDAIGVSCEDNLYWKQH 188
++LL W G P +++ + D G YW +H
Sbjct: 99 EYLLKWEGYDDPSDNTWSSEADCSGCKQLIEAYWNEH 135
>SPBC4B4.08 |ght2||hexose transporter Ght2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 531
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 187 CVASNTSCLHKTRRWRRQAG*ENSLW 264
C+ T LHKT +WR G N LW
Sbjct: 168 CINMGTHKLHKTAQWRVSIG-INLLW 192
>SPCC1235.14 |ght5||hexose transporter Ght5 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 546
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 187 CVASNTSCLHKTRRWRRQAG*ENSLW 264
C+ T LHKT +WR G N LW
Sbjct: 164 CINMGTHKLHKTAQWRVSMG-INLLW 188
>SPCC548.06c |ght8||hexose transporter Ght8 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 547
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +1
Query: 187 CVASNTSCLHKTRRWRRQAG*ENSLW 264
C+ T LHKT +WR G N LW
Sbjct: 164 CINMGTHKLHKTAQWRVSMG-INLLW 188
>SPCC777.08c |||HbrB family protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 422
Score = 26.2 bits (55), Expect = 4.3
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = +3
Query: 51 PRSPTRCSTSPRAPSTRTRLPLSELSTERHH*QQD 155
P SP+ + ++ ST+T+L L LS +H +D
Sbjct: 107 PTSPSNVNAEVQSISTKTQLSLLNLSPHKHKKPKD 141
>SPAC1952.17c ||SPAC890.01c|GTPase activating
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 619
Score = 25.8 bits (54), Expect = 5.6
Identities = 14/33 (42%), Positives = 18/33 (54%)
Frame = +2
Query: 467 KGIKAHFNMDDSGILNLVNVEFVAEKTVTEDED 565
K ++AHFN+D +LNL KT DED
Sbjct: 432 KLLQAHFNVDMPKLLNLTFELQHLRKTSKNDED 464
>SPAPB1A10.09 |ase1||microtubule-associated protein Ase1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 731
Score = 25.4 bits (53), Expect = 7.5
Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 5/41 (12%)
Frame = +3
Query: 27 GRACPPCWP--RSPTRCSTSPRAPSTR---TRLPLSELSTE 134
GR P P RS +R TSPR P R T+ P +S E
Sbjct: 499 GRVAVPSTPSVRSASRAMTSPRTPLPRVKNTQNPSRSISAE 539
>SPAC29A4.08c |prp19|cwf8|ubiquitin-protein ligase E4
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 488
Score = 25.0 bits (52), Expect = 9.9
Identities = 23/89 (25%), Positives = 42/89 (47%)
Frame = +2
Query: 392 LNLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFVAEKTVTEDEDKD 571
L+ + SL + + E E + A F+ D+ G ++ +E V E + E +D+
Sbjct: 101 LSTALYSLDAALRVISRLTKERDEAREALAKFS-DNIGTVSSKTIE-VQEVEMGESDDQL 158
Query: 572 STLSKIGSTISKLFGSDSXTPEKTEEQPQ 658
T + ST+ K F S ++T+ QP+
Sbjct: 159 KT--SLRSTVEKTFQELSSKRKRTKLQPK 185
>SPCC737.06c |||glutamate-cysteine ligase regulatory subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 287
Score = 25.0 bits (52), Expect = 9.9
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 296 ITFNKHTEDFSFNVNYAELDHIPSTELQ 379
ITF K + + S N Y +D IP E+Q
Sbjct: 129 ITFLKESGNSSSNEIYDSIDEIPPQEIQ 156
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,575,870
Number of Sequences: 5004
Number of extensions: 52853
Number of successful extensions: 211
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 211
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 305854096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -