Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_M22
(670 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_1137 + 27903012-27904196,27904330-27904542,27905775-279058... 62 3e-10
02_05_0491 + 29470575-29471351,29471574-29471806,29472697-294728... 56 3e-08
01_01_0573 + 4253484-4254653,4255526-4255735,4255842-4255937,425... 50 2e-06
05_01_0550 + 4820086-4821255,4822112-4822321,4822429-4822524,482... 49 4e-06
06_03_1403 + 29923503-29923821,29924269-29924405,29924495-299246... 35 0.067
03_02_0542 - 9348126-9349585,9352433-9352655 35 0.067
11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836 31 0.63
11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,443... 31 0.63
03_05_0877 + 28443481-28443538,28443641-28443911,28444028-284442... 31 0.63
11_01_0564 - 4447078-4448519,4449465-4449711 31 0.83
07_03_1182 - 24610862-24611637,24612223-24612340,24612441-246141... 31 1.1
05_03_0397 + 13488642-13488941,13489711-13489963,13490594-134906... 30 1.5
05_05_0109 - 22454539-22456268,22457069-22457279 30 1.9
03_06_0484 + 34233042-34233258,34235317-34237049 30 1.9
03_02_0546 - 9381989-9383733,9385838-9386054 30 1.9
03_02_0540 + 9340379-9340592,9341250-9342988 30 1.9
01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229 30 1.9
01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146 30 1.9
02_05_0916 - 32706039-32706332,32707483-32708103,32708450-327090... 29 2.5
09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659 29 3.3
03_01_0093 - 745434-746057,746492-747112,747222-747791,747870-74... 29 3.3
12_02_0824 + 23469147-23469848 29 4.4
04_04_0838 - 28550036-28550237,28550595-28550676,28550972-285510... 29 4.4
03_01_0458 - 3521938-3522024,3522133-3522213,3522673-3522806,352... 29 4.4
11_04_0418 - 17443989-17444082,17445153-17445406,17445709-174457... 28 5.9
02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580 28 5.9
11_06_0513 + 24466131-24469487 28 7.7
02_01_0742 + 5524149-5524214,5524609-5524641,5524750-5524880,552... 28 7.7
>06_03_1137 +
27903012-27904196,27904330-27904542,27905775-27905867,
27905940-27906008,27906412-27906612,27906688-27906834,
27907524-27907652,27909001-27909131,27909240-27909333
Length = 753
Score = 62.5 bits (145), Expect = 3e-10
Identities = 36/129 (27%), Positives = 60/129 (46%)
Frame = +2
Query: 14 VAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLATGYKVAPLNVRDAVL 193
+ G GSRVP + EP+R++NA E G + A L+ ++V V+DA+
Sbjct: 342 LVGSGSRVPAIARILAGFFRREPSRTLNASECVARGCALQCAMLSPTFRVREYEVQDAI- 400
Query: 194 LPIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTEDFSFNVNYAELDHIPSTE 373
P + F + L LF +P P KV+T +K+++ F + Y + + +P
Sbjct: 401 -PSSIGFCTSEGPISTLPSNALFQRGHPLPSVKVVTLHKNSK-FKLDAFYVDENELPPGT 458
Query: 374 LQYIGALNL 400
IGA +
Sbjct: 459 STKIGAFQI 467
>02_05_0491 + 29470575-29471351,29471574-29471806,29472697-29472856,
29473149-29473394,29473492-29473628,29473874-29474207,
29474283-29474444,29474717-29474791,29474866-29474966,
29475042-29475111,29475210-29475266,29475357-29475418,
29475505-29475577,29475663-29475884
Length = 902
Score = 56.0 bits (129), Expect = 3e-08
Identities = 60/218 (27%), Positives = 101/218 (46%), Gaps = 9/218 (4%)
Frame = +2
Query: 20 GGGSRVPXXXXXXXXXX-QHEPARSINADEAATLGAVYRAASLATGYKVAPLNVRDAVLL 196
GG +RVP + + + ++ADEA LGA AA+L+ G K LN + ++
Sbjct: 381 GGATRVPKLQAKLQEFLGRSDLDKHLDADEAIVLGASLHAANLSDGIK---LNRKLGMID 437
Query: 197 PIQVVFTRHADGVDKLVKRTLFGPMNPYPQK---KVITFNKHTEDFSFNVNYAELDHIPS 367
F +G D + + + P +K K+ +HT+DF +++Y + +P
Sbjct: 438 GSTYGFVFEINGPDYVKDESTDQLLVPRMKKLGIKMFRSIRHTKDFDVSISYEKASELPP 497
Query: 368 TELQYIGALNLSEVSLSGVSAALGKHVGENVEHKGIKA--HFNMDDSGILNLVNVEFVAE 541
+ + E S+SG++ A K+ N+ IKA HF++ SGI++L E V E
Sbjct: 498 G----VTSHKFVEYSVSGLTDASEKYSSRNLS-APIKANLHFSLSRSGIISLDRAEAVIE 552
Query: 542 KTV-TEDEDKDSTL--SKIGSTISKLFGSDSXTPEKTE 646
T E K+ TL + T+S G+ + T + E
Sbjct: 553 ITEWVEVPKKNLTLESNSTSQTLSSEGGAANDTSDSKE 590
>01_01_0573 +
4253484-4254653,4255526-4255735,4255842-4255937,
4256034-4256255,4256829-4257023,4257097-4257243,
4257323-4257472,4257762-4257892,4257978-4258194
Length = 845
Score = 50.0 bits (114), Expect = 2e-06
Identities = 33/113 (29%), Positives = 48/113 (42%), Gaps = 1/113 (0%)
Frame = +2
Query: 14 VAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLATGYKVAPLNVRDAVL 193
V G GSRVP EP R++NA E G A L+ +KV V D
Sbjct: 337 VVGSGSRVPAIIKILTDFFGKEPRRTMNASECVARGCALECAILSPTFKVREFQVNDG-- 394
Query: 194 LPIQVVFTRHADGVDKLVKRTLFGPM-NPYPQKKVITFNKHTEDFSFNVNYAE 349
P + + D + ++T+ P NP P K +TF + + F +V Y +
Sbjct: 395 FPFSIAMSWKPDSQNGDNQQTVVFPKGNPLPSVKALTFYR-SNTFQVDVTYVD 446
>05_01_0550 +
4820086-4821255,4822112-4822321,4822429-4822524,
4822610-4822828,4823201-4823395,4823466-4823612,
4823712-4823861,4825015-4825145,4825234-4825477
Length = 853
Score = 48.8 bits (111), Expect = 4e-06
Identities = 32/117 (27%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Frame = +2
Query: 14 VAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLATGYKVAPLNVRDAVL 193
V G GSRVP EP R++NA E G + A L+ +KV V D
Sbjct: 337 VVGSGSRVPAIIRIITEFFGKEPRRTMNASECVARGCALQCAVLSPTFKVREFEVNDG-- 394
Query: 194 LPIQVVFTRHADGVDKLVKRTLFGPM-NPYPQKKVITFNKHTEDFSFNVNYAELDHI 361
P + + D + ++T+ P +P P K +TF + + F+ +V + D +
Sbjct: 395 FPFSIALSCKPDSENTESEQTIVFPKGSPVPSAKTVTFYR-SNTFAVDVVSVDADDL 450
>06_03_1403 +
29923503-29923821,29924269-29924405,29924495-29924647,
29924690-29925280,29925523-29925597,29925901-29926169,
29927238-29927331
Length = 545
Score = 34.7 bits (76), Expect = 0.067
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 7/95 (7%)
Frame = +2
Query: 389 ALNLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVE------FVAEKTV 550
A+ L E+ L A+ G+H G + E G + + D G + V E + E +
Sbjct: 416 AMQLLEIGLKASGASGGEHPGGDDEGSGGEFFASGGDGGDEDTVLEEIDPAEVYTLEDFL 475
Query: 551 TEDEDKDSTLSKIGSTI-SKLFGSDSXTPEKTEEQ 652
EDE +S KIG + +K+ GS S P + + Q
Sbjct: 476 AEDEIMESFRRKIGDKLKAKIEGSSSGPPRRRQRQ 510
>03_02_0542 - 9348126-9349585,9352433-9352655
Length = 560
Score = 34.7 bits (76), Expect = 0.067
Identities = 35/118 (29%), Positives = 50/118 (42%), Gaps = 4/118 (3%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEP-ARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +R+P + RSIN DEA GA +AA L G ++RD
Sbjct: 351 VVLVGGSTRIPKVRSLLQDLFDGKALCRSINPDEAVAHGAAVKAA-LLNG-DANEKDLRD 408
Query: 185 AVLL---PIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTEDFSFNVNYAE 349
VLL P+ + G+ L+ R P++ QK T + NVN E
Sbjct: 409 VVLLDVTPLSLGIEVFGGGMSVLIPRNTTIPVS--RQKMYTTHYDNETAVLINVNEGE 464
>11_01_0565 - 4457019-4457052,4457175-4458675,4460791-4460836
Length = 526
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPAR-SINADEAATLGAVYRAASL 145
+V+ GG SR+P Q + R S+N DEA GA +A+ L
Sbjct: 305 VVLVGGSSRIPKVQSMLHDFFQEKKLRHSVNPDEAVAYGAAIQASIL 351
>11_01_0563 + 4423609-4423846,4424671-4426132,4428949-4429364,
4430555-4432052,4432199-4432217,4432469-4432675,
4432814-4433065
Length = 1363
Score = 31.5 bits (68), Expect = 0.63
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPAR-SINADEAATLGAVYRAASL 145
+V+ GG SR+P Q + R S+N DEA GA +A+ L
Sbjct: 996 VVLVGGSSRIPKLQSMLHDFFQEKKLRHSVNPDEAVAYGAAIQASIL 1042
>03_05_0877 +
28443481-28443538,28443641-28443911,28444028-28444242,
28444329-28445057,28445143-28445297,28445384-28445965
Length = 669
Score = 31.5 bits (68), Expect = 0.63
Identities = 51/193 (26%), Positives = 80/193 (41%), Gaps = 6/193 (3%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +R+P EP + IN DEA GA + S+ +G A +D
Sbjct: 369 IVLVGGSTRIPKVQELLKEMFDGKEPTKGINPDEAVAYGAAVQ-GSIISGEGGA--ETKD 425
Query: 185 AVLLPIQ--VVFTRHADGV-DKLVKRTLFGPMNPYPQKKVITFNKHTEDFSFNVNYAELD 355
+LL + + A GV KL+ R P KK F + ED V+ +
Sbjct: 426 ILLLDVTPLTLGIETAGGVMTKLIPRN-----TRIPVKKSQVFTTY-EDHQTTVSIKVFE 479
Query: 356 HIPSTELQYIGALNLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
S L LSG++ A + V + I+ F +D++GIL++ +
Sbjct: 480 GERSLTKD---CRELGRFDLSGIAPA-PRGVPQ------IEVTFEVDENGILHVTASDKA 529
Query: 536 A--EKTVTEDEDK 568
A K++T DK
Sbjct: 530 AGRSKSITITNDK 542
>11_01_0564 - 4447078-4448519,4449465-4449711
Length = 562
Score = 31.1 bits (67), Expect = 0.83
Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLATG 154
+V+ GG +R+P E RSIN DEA GA +A+ L G
Sbjct: 358 VVLVGGSTRIPKVQKMLSEFFDGKELCRSINPDEAVAYGAAIQASILCGG 407
>07_03_1182 -
24610862-24611637,24612223-24612340,24612441-24614120,
24614253-24614320,24615370-24615550
Length = 940
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/70 (28%), Positives = 33/70 (47%)
Frame = +3
Query: 30 RACPPCWPRSPTRCSTSPRAPSTRTRLPLSELSTERHH*QQDTKWPL*MYEMLCCFQYKL 209
R+ PP P+SP++ S+ +P RTR S+ + H + +K P M+ +
Sbjct: 572 RSRPPVSPKSPSKKSSEAASPGGRTRTKPSQ--GKNHRDNEVSKSPRSRISMVKEIDISI 629
Query: 210 SSQDTPMAST 239
P+AST
Sbjct: 630 MDFQKPLAST 639
>05_03_0397 +
13488642-13488941,13489711-13489963,13490594-13490673,
13491251-13491393,13491512-13491610,13491785-13491974,
13492504-13492902,13492993-13493400
Length = 623
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/47 (27%), Positives = 23/47 (48%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLA 148
+++ GG +R+P +P ++N DE LGA +A L+
Sbjct: 314 VILVGGSTRIPAVQDLVKKMTGKDPNVTVNPDEVVALGAAVQAGVLS 360
>05_05_0109 - 22454539-22456268,22457069-22457279
Length = 646
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLA 148
+V+ GG +R+P E +SIN DEA GA +AA L+
Sbjct: 339 VVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 386
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLA 148
+V+ GG +R+P E +SIN DEA GA +AA L+
Sbjct: 341 VVLVGGSTRIPRVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 388
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLA 148
+V+ GG +R+P E +SIN DEA GA +AA L+
Sbjct: 341 VVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 388
>03_02_0540 + 9340379-9340592,9341250-9342988
Length = 650
Score = 29.9 bits (64), Expect = 1.9
Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +R+P E +SIN DEA GA +AA L TG V+D
Sbjct: 340 VVLVGGSTRIPRVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAIL-TG--EGNEKVQD 396
Query: 185 AVLLPI 202
+LL +
Sbjct: 397 LLLLDV 402
>01_06_1291 + 36032088-36032299,36032737-36033314,36034494-36036229
Length = 841
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLA 148
+V+ GG +R+P E +SIN DEA GA +AA L+
Sbjct: 532 VVLVGGSTRIPKVQQLLQDFFNGKELCKSINPDEAVAYGAAVQAAILS 579
>01_01_0720 - 5593311-5595371,5597550-5598027,5598118-5598146
Length = 855
Score = 29.9 bits (64), Expect = 1.9
Identities = 12/30 (40%), Positives = 15/30 (50%)
Frame = +3
Query: 12 WWRGAGRACPPCWPRSPTRCSTSPRAPSTR 101
WW A PP PRSP+ + P P T+
Sbjct: 45 WWADELAAAPPLPPRSPSPSPSPPPPPPTK 74
>02_05_0916 -
32706039-32706332,32707483-32708103,32708450-32709070,
32709183-32709752,32709840-32709918,32710002-32710075,
32711336-32711398
Length = 773
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASL 145
+++ GG +RVP P++ +N DEA +GA + L
Sbjct: 382 VLLVGGMTRVPKVQEIVSEIFGKSPSKGVNPDEAVAMGAAIQGGIL 427
>09_02_0111 - 4386913-4387295,4388000-4388078,4389553-4390659
Length = 522
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = -1
Query: 325 EILCVLIESDHLLLWVGVHRPKESSLNQLVDAIGVSCEDNLYWKQH 188
E +CV ++ D WV +R E L + GV+ E + +W ++
Sbjct: 157 EAVCVAVDVDRPRAWVATYRDGECRWRALPRSRGVAIEFDPHWLEY 202
>03_01_0093 -
745434-746057,746492-747112,747222-747791,747870-747948,
748258-748331,748385-748387
Length = 656
Score = 29.1 bits (62), Expect = 3.3
Identities = 13/46 (28%), Positives = 22/46 (47%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASL 145
+++ GG +RVP P++ +N DEA +GA + L
Sbjct: 362 VLLVGGMTRVPKVQEVVSEIFGKAPSKGVNPDEAVAMGAAIQGGIL 407
>12_02_0824 + 23469147-23469848
Length = 233
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/35 (40%), Positives = 17/35 (48%)
Frame = +3
Query: 6 GWWWRGAGRACPPCWPRSPTRCSTSPRAPSTRTRL 110
G+W +GR P W R RC T P+T RL
Sbjct: 77 GFW---SGRVVPRTWCRDGGRCDTGNAPPATVVRL 108
>04_04_0838 -
28550036-28550237,28550595-28550676,28550972-28551011,
28551342-28551416,28551448-28551543,28551710-28551805,
28551897-28551974,28552064-28552170,28552450-28552477,
28552777-28552898,28554106-28554172,28554336-28554508,
28554763-28554846,28555616-28555733,28556093-28556164,
28557026-28557118,28557484-28557636,28558000-28558086,
28559436-28559528,28560416-28560643,28561106-28561207,
28561390-28561596,28561798-28561846,28562385-28562537,
28562649-28562712,28562905-28563175,28564008-28564072,
28564184-28564337
Length = 1052
Score = 28.7 bits (61), Expect = 4.4
Identities = 16/37 (43%), Positives = 21/37 (56%)
Frame = +2
Query: 185 AVLLPIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKV 295
A LLP V TR+A+ V+ KR L P P++KV
Sbjct: 668 ATLLPSAPVLTRYAESVNPFAKRKLIVP--TVPEEKV 702
>03_01_0458 -
3521938-3522024,3522133-3522213,3522673-3522806,
3523189-3523270,3523420-3523692,3523953-3524162,
3524252-3524337,3525197-3525289,3526003-3526227,
3526320-3526930,3529328-3529395,3529491-3529679,
3529773-3529901,3530013-3532484
Length = 1579
Score = 28.7 bits (61), Expect = 4.4
Identities = 20/53 (37%), Positives = 24/53 (45%)
Frame = +2
Query: 491 MDDSGILNLVNVEFVAEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTEE 649
+D + L ++ E V D DKDS S I ST K SDS T EE
Sbjct: 437 VDATAALKILEEELA--DNVGSDRDKDSMSSDIWSTKDKSDTSDSSTSPHNEE 487
>11_04_0418 -
17443989-17444082,17445153-17445406,17445709-17445783,
17446156-17446377,17446789-17446941,17447031-17447167,
17447615-17447933
Length = 417
Score = 28.3 bits (60), Expect = 5.9
Identities = 24/90 (26%), Positives = 38/90 (42%), Gaps = 2/90 (2%)
Frame = +2
Query: 389 ALNLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVE-FVAEKTVTEDED 565
A+ L E L A+ G G E +D+ + + E + E + EDE
Sbjct: 293 AMQLLESGLKASGASGGDGEGSGGEFFASGGDGGNEDTVLEEIDPAEVYTLEDFLAEDEI 352
Query: 566 KDSTLSKIGSTI-SKLFGSDSXTPEKTEEQ 652
+S KIG + +K+ GS S P + + Q
Sbjct: 353 MESFRRKIGDKLKAKIEGSSSGPPRRRQRQ 382
>02_03_0076 - 14861337-14861974,14862008-14862119,14862150-14863580
Length = 726
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/34 (41%), Positives = 17/34 (50%)
Frame = +1
Query: 124 CLQSGIISNRIQSGPSECTRCCVASNTSCLHKTR 225
CL G I++ SGP C C A + SC TR
Sbjct: 233 CLDKGHIASNC-SGPVRCHSCLEAGHMSCFCATR 265
>11_06_0513 + 24466131-24469487
Length = 1118
Score = 27.9 bits (59), Expect = 7.7
Identities = 12/39 (30%), Positives = 25/39 (64%), Gaps = 2/39 (5%)
Frame = +2
Query: 332 NVNYAELDHIPST--ELQYIGALNLSEVSLSGVSAALGK 442
N++ ++D +P + LQY+ +LN+S+ ++ V +GK
Sbjct: 646 NLSQTDIDKLPESIGRLQYLVSLNISQTCIATVPDYIGK 684
>02_01_0742 +
5524149-5524214,5524609-5524641,5524750-5524880,
5525174-5525282,5525406-5525522,5525896-5525961,
5526314-5526376,5526459-5526503,5526690-5526751,
5526974-5527067,5527375-5527467,5527561-5527630,
5527816-5527892,5527976-5528033,5528135-5528166,
5528245-5528376
Length = 415
Score = 27.9 bits (59), Expect = 7.7
Identities = 15/46 (32%), Positives = 21/46 (45%)
Frame = +2
Query: 518 VNVEFVAEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTEEQP 655
V+V F+ EK + + LSK+ S G S EKT + P
Sbjct: 310 VSVPFLQEKDIPSHIRDEEKLSKLASLSQGAAGESSTAREKTPDAP 355
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,613,278
Number of Sequences: 37544
Number of extensions: 365017
Number of successful extensions: 1356
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1314
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1351
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1691314196
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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