Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_M22
(670 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical pr... 113 8e-26
Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical pr... 99 2e-21
Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical pr... 99 2e-21
L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical pr... 46 3e-05
X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein. 33 0.18
U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock prot... 33 0.18
AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock pr... 33 0.18
M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein ( C.ele... 31 0.56
Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical pr... 31 0.98
U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock prot... 30 1.3
M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C. el... 30 1.3
Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical p... 30 1.7
Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical p... 30 1.7
Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical p... 30 1.7
Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical p... 30 1.7
Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical pr... 30 1.7
AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose 4... 30 1.7
AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose 4... 30 1.7
Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical pr... 29 3.9
Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical pr... 27 9.1
Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical pr... 27 9.1
U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical pr... 27 9.1
M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein ( C.ele... 27 9.1
>U28940-6|AAA68352.1| 925|Caenorhabditis elegans Hypothetical protein
T24H7.2 protein.
Length = 925
Score = 113 bits (273), Expect = 8e-26
Identities = 79/239 (33%), Positives = 121/239 (50%), Gaps = 21/239 (8%)
Frame = +2
Query: 5 RLVVAGGGSRVPXXXXXXXXXX-QHEPARSINADEAATLGAVYRAASLATGYKVAPLNVR 181
+ V+ G G+RVP E + +N DEA +GA+++AA L+ G+KV P N+
Sbjct: 368 QFVLMGAGTRVPKVQEIVQKTIGTKEIGKFLNTDEAVAMGALFQAAHLSKGFKVKPFNIE 427
Query: 182 DAVLLPIQVVF--------TRHADGVDKLVKRTLFGPMNPYP-QKKVITFNKHTEDFSFN 334
+ V+ P++V F T G +K V +TLF + YP K I+ +++DFS
Sbjct: 428 EKVIFPVEVHFVSKIRDEKTEEITG-EKNVVKTLFAANSVYPTHPKTISLTSYSDDFSVA 486
Query: 335 VNYAELDHIPSTELQYIGAL--NLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGI 508
+ Y +++ ++Q IG+L NL +V +SG+S AL E E KG+K F +D SGI
Sbjct: 487 LKYGKIESFTKQQVQEIGSLLDNLVDVEISGLSEALKNRSSEESEFKGVKVSFIVDASGI 546
Query: 509 LNLVNVEFVAEKTVTEDEDKDSTLSKIGSTISKLFGS---------DSXTPEKTEEQPQ 658
+ + E + E K + I STIS LF S D TP+ TEE+ +
Sbjct: 547 VRVRRAEALF-------EPKSGLVGSIASTISGLFSSKTEEGEPTTDDSTPQSTEEKTE 598
>Z67884-4|CAH60753.1| 905|Caenorhabditis elegans Hypothetical
protein T14G8.3b protein.
Length = 905
Score = 99.1 bits (236), Expect = 2e-21
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQH-EPARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ G G+RVP + E + +N DEA +GAVY+AA L+ +KV P NV +
Sbjct: 356 VVLMGAGTRVPKVKEILKTILKDKEISNFLNTDEAIAMGAVYQAAHLSKSFKVLPFNVHE 415
Query: 185 AVLLPIQVVF-TRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTEDFSFNVNYAELDHI 361
+L P+ V F T+ +G K ++++LFG P P +V+ F+ +++DF ++ + D
Sbjct: 416 KILYPVFVNFLTKTEEGTMKPIRKSLFGENYPVP-NRVMHFSSYSDDFKIDIQ--DADKN 472
Query: 362 PSTELQYIGALNLSEVSLSGVSAALGKHV-GENVEHKGIKAHFNMDDSGILNLVNVEFVA 538
P LS V +SGV A+ K V EN KG+K F++D SGI+++ V
Sbjct: 473 P-----------LSTVEISGVKDAIEKEVTDENSVLKGVKTTFSIDLSGIVSVEKASVVV 521
Query: 539 EKTVT-EDEDK 568
EK T E++DK
Sbjct: 522 EKVPTPEEKDK 532
>Z67884-3|CAA91809.2| 921|Caenorhabditis elegans Hypothetical
protein T14G8.3a protein.
Length = 921
Score = 99.1 bits (236), Expect = 2e-21
Identities = 67/191 (35%), Positives = 105/191 (54%), Gaps = 4/191 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQH-EPARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ G G+RVP + E + +N DEA +GAVY+AA L+ +KV P NV +
Sbjct: 372 VVLMGAGTRVPKVKEILKTILKDKEISNFLNTDEAIAMGAVYQAAHLSKSFKVLPFNVHE 431
Query: 185 AVLLPIQVVF-TRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTEDFSFNVNYAELDHI 361
+L P+ V F T+ +G K ++++LFG P P +V+ F+ +++DF ++ + D
Sbjct: 432 KILYPVFVNFLTKTEEGTMKPIRKSLFGENYPVP-NRVMHFSSYSDDFKIDIQ--DADKN 488
Query: 362 PSTELQYIGALNLSEVSLSGVSAALGKHV-GENVEHKGIKAHFNMDDSGILNLVNVEFVA 538
P LS V +SGV A+ K V EN KG+K F++D SGI+++ V
Sbjct: 489 P-----------LSTVEISGVKDAIEKEVTDENSVLKGVKTTFSIDLSGIVSVEKASVVV 537
Query: 539 EKTVT-EDEDK 568
EK T E++DK
Sbjct: 538 EKVPTPEEKDK 548
>L09634-1|AAA27967.1| 776|Caenorhabditis elegans Hypothetical
protein C30C11.4 protein.
Length = 776
Score = 45.6 bits (103), Expect = 3e-05
Identities = 29/126 (23%), Positives = 62/126 (49%)
Frame = +2
Query: 14 VAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLATGYKVAPLNVRDAVL 193
+ GG SR+P EP ++N DEA GA + A L+ ++V ++D
Sbjct: 343 IVGGSSRIPMIREIVKDLFGKEPKTTMNQDEAVARGAAMQCAILSPTFRVREFAIKDT-- 400
Query: 194 LPIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTEDFSFNVNYAELDHIPSTE 373
P ++ + ++ G + + +F P + P K+++ + + F+ +YA+ + +P +
Sbjct: 401 QPYRIRLSWNSTG-ENGGENDVFSPRDEVPFSKLVSLLR-SGPFNVEAHYAQPNVVPHNQ 458
Query: 374 LQYIGA 391
+ +IG+
Sbjct: 459 V-HIGS 463
>X07678-1|CAA30525.1| 487|Caenorhabditis elegans hsp6F protein.
Length = 487
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 2 ARLVVAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLA 148
A +++ GG SR+P P++++N DEA +GA + A LA
Sbjct: 360 ADVLLVGGMSRMPKVQATVQEIFGKVPSKAVNPDEAVAMGAAIQGAVLA 408
>U88315-3|AAB42371.1| 657|Caenorhabditis elegans Heat shock protein
protein 6 protein.
Length = 657
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 2 ARLVVAGGGSRVPXXXXXXXXXXQHEPARSINADEAATLGAVYRAASLA 148
A +++ GG SR+P P++++N DEA +GA + A LA
Sbjct: 360 ADVLLVGGMSRMPKVQATVQEIFGKVPSKAVNPDEAVAMGAAIQGAVLA 408
>AF000264-1|AAC71123.1| 657|Caenorhabditis elegans Heat shock
protein protein 4 protein.
Length = 657
Score = 33.1 bits (72), Expect = 0.18
Identities = 30/101 (29%), Positives = 45/101 (44%), Gaps = 1/101 (0%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +R+P EP+R IN DEA GA +A + G + N D
Sbjct: 361 IVLVGGSTRIPKVQQLIKDYFNGKEPSRGINPDEAVAYGAAVQAGVIG-GVE----NTGD 415
Query: 185 AVLLPIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFN 307
VLL + + T + V ++ + L G P KK F+
Sbjct: 416 VVLLDVNPL-TLGIETVGGVMTK-LIGRNTVIPTKKSQVFS 454
>M18540-1|AAA28078.1| 640|Caenorhabditis elegans protein (
C.elegans heat shockprotein 70A gene, complete cds. ).
Length = 640
Score = 31.5 bits (68), Expect = 0.56
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 9/198 (4%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +R+P E +SIN DEA GA +AA L+ A V+D
Sbjct: 335 IVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEALAYGAAVQAAILSGDKSEA---VQD 391
Query: 185 AVLL---PIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTEDF-SFNVNYAEL 352
+LL P+ + + L+KR P K TF ++++ + E
Sbjct: 392 LLLLDVAPLSLGIETAGGVMTALIKRN-----TTIPTKTAQTFTTYSDNQPGVLIQVYEG 446
Query: 353 DHIPSTELQYIGALNLSEVSLSGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEF 532
+ + + +G + LSG+ A + V + I+ F++D +GILN+ +
Sbjct: 447 ERAMTKDNNLLG-----KFELSGIPPA-PRGVPQ------IEVTFDIDANGILNVSATDK 494
Query: 533 VAEK----TVTEDEDKDS 574
K T+T D+D+ S
Sbjct: 495 STGKAKQITITNDKDRFS 512
>Z80223-1|CAB02319.1| 640|Caenorhabditis elegans Hypothetical
protein F26D10.3 protein.
Length = 640
Score = 30.7 bits (66), Expect = 0.98
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +R+P E +SIN DEA GA +AA L+ A V+D
Sbjct: 335 IVLVGGSTRIPKVQKLLSDLFSGKELNKSINPDEAVAYGAAVQAAILSGDKSEA---VQD 391
Query: 185 AVLLPI 202
+LL +
Sbjct: 392 LLLLDV 397
>U56965-1|AAB52671.1| 661|Caenorhabditis elegans Heat shock protein
protein 3 protein.
Length = 661
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLA 148
+V+ GG +R+P EP+R IN DEA GA + ++
Sbjct: 364 IVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVIS 411
>M26604-1|AAA28074.1| 661|Caenorhabditis elegans protein ( C.
elegans BiP (hsp3)gene, complete cds. ).
Length = 661
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/48 (31%), Positives = 23/48 (47%), Gaps = 1/48 (2%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQ-HEPARSINADEAATLGAVYRAASLA 148
+V+ GG +R+P EP+R IN DEA GA + ++
Sbjct: 364 IVLVGGSTRIPKVQQLIKEFFNGKEPSRGINPDEAVAYGAAVQGGVIS 411
>Z68215-14|CAL49436.1| 394|Caenorhabditis elegans Hypothetical
protein C53B4.7e protein.
Length = 394
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 359 IPSTELQYIGALNLSEVSL-SGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
+ +T + A +V+L +G+S G ++ E + KG K H + S N +E +
Sbjct: 31 VSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL 90
Query: 536 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTE 646
+T D +L T S T E TE
Sbjct: 91 YSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTE 127
>Z68215-13|CAL49435.1| 382|Caenorhabditis elegans Hypothetical
protein C53B4.7d protein.
Length = 382
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 359 IPSTELQYIGALNLSEVSL-SGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
+ +T + A +V+L +G+S G ++ E + KG K H + S N +E +
Sbjct: 19 VSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL 78
Query: 536 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTE 646
+T D +L T S T E TE
Sbjct: 79 YSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTE 115
>Z68215-12|CAA92455.2| 368|Caenorhabditis elegans Hypothetical
protein C53B4.7c protein.
Length = 368
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 359 IPSTELQYIGALNLSEVSL-SGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
+ +T + A +V+L +G+S G ++ E + KG K H + S N +E +
Sbjct: 5 VSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL 64
Query: 536 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTE 646
+T D +L T S T E TE
Sbjct: 65 YSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTE 101
>Z68215-10|CAC42269.1| 399|Caenorhabditis elegans Hypothetical
protein C53B4.7b protein.
Length = 399
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 359 IPSTELQYIGALNLSEVSL-SGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
+ +T + A +V+L +G+S G ++ E + KG K H + S N +E +
Sbjct: 36 VSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL 95
Query: 536 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTE 646
+T D +L T S T E TE
Sbjct: 96 YSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTE 132
>Z68215-9|CAC42270.1| 384|Caenorhabditis elegans Hypothetical
protein C53B4.7a protein.
Length = 384
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 359 IPSTELQYIGALNLSEVSL-SGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
+ +T + A +V+L +G+S G ++ E + KG K H + S N +E +
Sbjct: 21 VSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL 80
Query: 536 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTE 646
+T D +L T S T E TE
Sbjct: 81 YSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTE 117
>AM231684-1|CAJ77753.1| 384|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 384
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 359 IPSTELQYIGALNLSEVSL-SGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
+ +T + A +V+L +G+S G ++ E + KG K H + S N +E +
Sbjct: 21 VSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL 80
Query: 536 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTE 646
+T D +L T S T E TE
Sbjct: 81 YSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTE 117
>AM231683-1|CAJ77752.1| 399|Caenorhabditis elegans GDP-mannose
4,6-dehydratase protein.
Length = 399
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/97 (24%), Positives = 39/97 (40%), Gaps = 1/97 (1%)
Frame = +2
Query: 359 IPSTELQYIGALNLSEVSL-SGVSAALGKHVGENVEHKGIKAHFNMDDSGILNLVNVEFV 535
+ +T + A +V+L +G+S G ++ E + KG K H + S N +E +
Sbjct: 36 VSTTPAAELAAFRARKVALITGISGQDGSYLAELLLSKGYKVHGIIRRSSSFNTARIEHL 95
Query: 536 AEKTVTEDEDKDSTLSKIGSTISKLFGSDSXTPEKTE 646
+T D +L T S T E TE
Sbjct: 96 YSNPITHHGDSSFSLHYGDMTDSSCLIKLISTIEPTE 132
>Z83108-5|CAB05508.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.5 protein.
Length = 645
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPAR-SINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +RVP + SIN DEA GA +AA L+ V ++D
Sbjct: 335 VVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLS---GVKDETIKD 391
Query: 185 AVLLPI 202
+L+ +
Sbjct: 392 VLLVDV 397
>Z83108-4|CAB05507.1| 645|Caenorhabditis elegans Hypothetical
protein F44E5.4 protein.
Length = 645
Score = 28.7 bits (61), Expect = 3.9
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPAR-SINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +RVP + SIN DEA GA +AA L+ V ++D
Sbjct: 335 VVLVGGSTRVPKIQKLLKDFFNGKELNCSINPDEAVAFGAAVQAAVLS---GVKDETIKD 391
Query: 185 AVLLPI 202
+L+ +
Sbjct: 392 VLLVDV 397
>Z81467-1|CAB03871.1| 643|Caenorhabditis elegans Hypothetical
protein C12C8.1 protein.
Length = 643
Score = 28.7 bits (61), Expect = 3.9
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 1/106 (0%)
Frame = +2
Query: 8 LVVAGGGSRVPXXXXXXXXXXQHEPAR-SINADEAATLGAVYRAASLATGYKVAPLNVRD 184
+V+ GG +R+P + SIN DEA GA +AA L+ V ++D
Sbjct: 335 VVLVGGSTRIPKIQKLLKEFFNGKDLNCSINPDEAVAFGAAVQAAVLS---GVKDDTIKD 391
Query: 185 AVLLPIQVVFTRHADGVDKLVKRTLFGPMNPYPQKKVITFNKHTED 322
+L + VV H V L P K TF + ++
Sbjct: 392 VLL--VDVVPLSHGIETAGGVMTNLIDRNTRIPAKASKTFTTYADN 435
>Z34533-9|CAA84303.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 478 LNTFMFDIFANMFTQSRGNSTQRNLTQVQSTNVLQFSGWD 359
L + D+F N + T N+ Q+ ST L F W+
Sbjct: 197 LEKWSIDLFENTLVFCHNDLTSSNILQLNSTGELVFIDWE 236
>Z30973-5|CAA83224.2| 368|Caenorhabditis elegans Hypothetical
protein B0285.10 protein.
Length = 368
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/40 (30%), Positives = 18/40 (45%)
Frame = -1
Query: 478 LNTFMFDIFANMFTQSRGNSTQRNLTQVQSTNVLQFSGWD 359
L + D+F N + T N+ Q+ ST L F W+
Sbjct: 197 LEKWSIDLFENTLVFCHNDLTSSNILQLNSTGELVFIDWE 236
>U88172-8|AAB42258.1| 312|Caenorhabditis elegans Hypothetical
protein ZK354.3 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.1
Identities = 12/27 (44%), Positives = 15/27 (55%)
Frame = -2
Query: 495 SILKCALIPLCSTFSPTCLPKAAETPL 415
SI K + P CST PT P A+ P+
Sbjct: 36 SIRKPPMKPACSTIKPTDFPPASAAPI 62
>M28528-1|AAA28076.1| 288|Caenorhabditis elegans protein (
C.elegans heat shockprotein 4 gene, 3' end. ).
Length = 288
Score = 27.5 bits (58), Expect = 9.1
Identities = 25/76 (32%), Positives = 35/76 (46%)
Frame = +2
Query: 77 EPARSINADEAATLGAVYRAASLATGYKVAPLNVRDAVLLPIQVVFTRHADGVDKLVKRT 256
EP+R IN DEA GA +A + G + N D VLL + + T + V ++ +
Sbjct: 16 EPSRGINPDEAVAYGAAVQAGVIG-GVE----NTGDVVLLDVNPL-TLGIETVGGVMTK- 68
Query: 257 LFGPMNPYPQKKVITF 304
L G P KK F
Sbjct: 69 LIGRNTVIPTKKSQVF 84
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,518,094
Number of Sequences: 27780
Number of extensions: 303623
Number of successful extensions: 1125
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1013
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1120
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1508017654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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