Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_M22
         (670 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        25   0.65 
AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase prot...    23   2.0  
DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450 monoo...    22   4.6  
DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex det...    21   8.0  

>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 25.0 bits (52), Expect = 0.65
 Identities = 12/32 (37%), Positives = 16/32 (50%)
 Frame = +3

Query: 57  SPTRCSTSPRAPSTRTRLPLSELSTERHH*QQ 152
           S +  STSP A +T +  P    +   HH QQ
Sbjct: 72  SGSSASTSPAARTTSSMYPYVSAAAAHHHHQQ 103


>AY242387-1|AAO72539.2|  693|Apis mellifera prophenoloxidase
           protein.
          Length = 693

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 13/44 (29%), Positives = 17/44 (38%)
 Frame = +1

Query: 166 PSECTRCCVASNTSCLHKTRRWRRQAG*ENSLWAYEPLPTEEGD 297
           P E  R   AS+    H+   WR   G     W +  +   EGD
Sbjct: 178 PIEIPRDYTASDLDVEHRVAYWREDIGINLHHWHWHLVYPFEGD 221


>DQ244075-1|ABB36785.1|  548|Apis mellifera cytochrome P450
           monooxygenase protein.
          Length = 548

 Score = 22.2 bits (45), Expect = 4.6
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +3

Query: 453 KMSNIKVLRHISIWTTP 503
           KM +I  LRH  IW  P
Sbjct: 215 KMCDILHLRHTKIWLRP 231


>DQ325103-1|ABD14117.1|  182|Apis mellifera complementary sex
           determiner protein.
          Length = 182

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 8/29 (27%), Positives = 14/29 (48%)
 Frame = +2

Query: 302 FNKHTEDFSFNVNYAELDHIPSTELQYIG 388
           +N + +   +N+NY E   +P     Y G
Sbjct: 101 YNNYNKKLYYNINYIEQIPVPVPVPVYCG 129


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,406
Number of Sequences: 438
Number of extensions: 3640
Number of successful extensions: 6
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 20221290
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)