Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P04_F_M20
(475 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein ( C.ele... 99 8e-22
AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kina... 99 8e-22
Z35637-6|CAA84685.1| 341|Caenorhabditis elegans Hypothetical pr... 35 0.026
Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical p... 31 0.42
Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical pr... 31 0.42
AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical ... 30 0.74
AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical... 30 0.74
AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein... 30 0.74
AL117202-13|CAB55075.1| 580|Caenorhabditis elegans Hypothetical... 30 0.98
U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center... 29 1.3
Z81449-6|CAB03764.2| 489|Caenorhabditis elegans Hypothetical pr... 29 1.7
Z81449-5|CAB03762.2| 488|Caenorhabditis elegans Hypothetical pr... 29 1.7
U58751-3|AAN84880.1| 667|Caenorhabditis elegans Pctaire class c... 29 1.7
U58751-2|AAL00852.1| 700|Caenorhabditis elegans Pctaire class c... 29 1.7
U58751-1|AAB00656.1| 577|Caenorhabditis elegans Pctaire class c... 29 1.7
AF129110-1|AAD37120.1| 577|Caenorhabditis elegans Pct-1 protein. 29 1.7
>J05274-1|AAA27984.1| 360|Caenorhabditis elegans protein (
C.elegans casein kinaseII-alpha gene, complete cds. ).
Length = 360
Score = 99 bits (238), Expect = 8e-22
Identities = 40/59 (67%), Positives = 51/59 (86%)
Frame = +3
Query: 249 VPSRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 425
+PSRARVYA+VN RPREYWDYE+++++WG +DYQLVRKLGRGKYSEVFE ++ +E
Sbjct: 4 IPSRARVYAEVNPSRPREYWDYEAHMIEWGQIDDYQLVRKLGRGKYSEVFEGFKMSTDE 62
>AF067211-13|AAC16993.1| 360|Caenorhabditis elegans Protein kinase
protein 3 protein.
Length = 360
Score = 99 bits (238), Expect = 8e-22
Identities = 40/59 (67%), Positives = 51/59 (86%)
Frame = +3
Query: 249 VPSRARVYADVNSQRPREYWDYESYVVDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 425
+PSRARVYA+VN RPREYWDYE+++++WG +DYQLVRKLGRGKYSEVFE ++ +E
Sbjct: 4 IPSRARVYAEVNPSRPREYWDYEAHMIEWGQIDDYQLVRKLGRGKYSEVFEGFKMSTDE 62
>Z35637-6|CAA84685.1| 341|Caenorhabditis elegans Hypothetical
protein C03C10.1 protein.
Length = 341
Score = 35.1 bits (77), Expect = 0.026
Identities = 11/25 (44%), Positives = 20/25 (80%)
Frame = +3
Query: 351 YQLVRKLGRGKYSEVFEAINITNNE 425
Y+L+RK+G G + +++ +IN+TN E
Sbjct: 16 YKLIRKIGSGSFGDIYVSINVTNGE 40
>Z66521-10|CAH10788.1| 359|Caenorhabditis elegans Hypothetical
protein W02B12.12b protein.
Length = 359
Score = 31.1 bits (67), Expect = 0.42
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 348 DYQLVRKLGRGKYSEVFEAINITNN 422
D KLGRGKYS+V++A + NN
Sbjct: 93 DLDTSNKLGRGKYSKVYKAFDRNNN 117
>Z66521-9|CAA91402.1| 367|Caenorhabditis elegans Hypothetical
protein W02B12.12a protein.
Length = 367
Score = 31.1 bits (67), Expect = 0.42
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +3
Query: 348 DYQLVRKLGRGKYSEVFEAINITNN 422
D KLGRGKYS+V++A + NN
Sbjct: 93 DLDTSNKLGRGKYSKVYKAFDRNNN 117
>AL110501-9|CAB54507.2| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 30.3 bits (65), Expect = 0.74
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 345 EDYQLVRKLGRGKYSEVFEAINITNNE 425
E +QLVR +G G + V+E I+ TNN+
Sbjct: 480 EKFQLVRLIGDGNTAVVYEVIDKTNND 506
>AL033514-40|CAD36501.1| 802|Caenorhabditis elegans Hypothetical
protein Y79H2A.11 protein.
Length = 802
Score = 30.3 bits (65), Expect = 0.74
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 345 EDYQLVRKLGRGKYSEVFEAINITNNE 425
E +QLVR +G G + V+E I+ TNN+
Sbjct: 480 EKFQLVRLIGDGNTAVVYEVIDKTNND 506
>AJ319870-1|CAC67459.1| 802|Caenorhabditis elegans ZYG-8 protein
protein.
Length = 802
Score = 30.3 bits (65), Expect = 0.74
Identities = 13/27 (48%), Positives = 19/27 (70%)
Frame = +3
Query: 345 EDYQLVRKLGRGKYSEVFEAINITNNE 425
E +QLVR +G G + V+E I+ TNN+
Sbjct: 480 EKFQLVRLIGDGNTAVVYEVIDKTNND 506
>AL117202-13|CAB55075.1| 580|Caenorhabditis elegans Hypothetical
protein Y47D3A.16 protein.
Length = 580
Score = 29.9 bits (64), Expect = 0.98
Identities = 11/27 (40%), Positives = 19/27 (70%)
Frame = +3
Query: 345 EDYQLVRKLGRGKYSEVFEAINITNNE 425
ED+QL++ LG+G Y +VF+ T ++
Sbjct: 81 EDFQLLKVLGKGGYGKVFQVRKTTGSD 107
>U55363-8|AAA97966.1| 829|Caenorhabditis elegans Germinal center
kinase family protein2 protein.
Length = 829
Score = 29.5 bits (63), Expect = 1.3
Identities = 10/26 (38%), Positives = 21/26 (80%)
Frame = +3
Query: 345 EDYQLVRKLGRGKYSEVFEAINITNN 422
+DY+L++++G G Y EV++A +I ++
Sbjct: 13 DDYELLQRVGSGTYGEVYKARDIRSD 38
>Z81449-6|CAB03764.2| 489|Caenorhabditis elegans Hypothetical
protein C46F11.5b protein.
Length = 489
Score = 29.1 bits (62), Expect = 1.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 328 LTGATKKTISWFASWV 375
+ AT++T+SWF SW+
Sbjct: 137 IASATRRTVSWFGSWI 152
>Z81449-5|CAB03762.2| 488|Caenorhabditis elegans Hypothetical
protein C46F11.5a protein.
Length = 488
Score = 29.1 bits (62), Expect = 1.7
Identities = 8/16 (50%), Positives = 13/16 (81%)
Frame = +1
Query: 328 LTGATKKTISWFASWV 375
+ AT++T+SWF SW+
Sbjct: 137 IASATRRTVSWFGSWI 152
>U58751-3|AAN84880.1| 667|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform c protein.
Length = 667
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 327 VDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 425
+ +G E Y+ + KLG G Y+ VF +I N+
Sbjct: 320 IGFGKLETYEKLDKLGEGTYATVFRGRSILTNK 352
>U58751-2|AAL00852.1| 700|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform b protein.
Length = 700
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 327 VDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 425
+ +G E Y+ + KLG G Y+ VF +I N+
Sbjct: 353 IGFGKLETYEKLDKLGEGTYATVFRGRSILTNK 385
>U58751-1|AAB00656.1| 577|Caenorhabditis elegans Pctaire class cell
cycle kinaseprotein 1, isoform a protein.
Length = 577
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 327 VDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 425
+ +G E Y+ + KLG G Y+ VF +I N+
Sbjct: 230 IGFGKLETYEKLDKLGEGTYATVFRGRSILTNK 262
>AF129110-1|AAD37120.1| 577|Caenorhabditis elegans Pct-1 protein.
Length = 577
Score = 29.1 bits (62), Expect = 1.7
Identities = 12/33 (36%), Positives = 19/33 (57%)
Frame = +3
Query: 327 VDWGNQEDYQLVRKLGRGKYSEVFEAINITNNE 425
+ +G E Y+ + KLG G Y+ VF +I N+
Sbjct: 230 IGFGKLETYEKLDKLGEGTYATVFRGRSILTNK 262
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,473,478
Number of Sequences: 27780
Number of extensions: 179491
Number of successful extensions: 544
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 536
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 544
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 860942358
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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