Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_M17
         (688 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    23   3.1  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    22   5.4  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    21   9.5  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    21   9.5  

>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 6/17 (35%), Positives = 11/17 (64%)
 Frame = -3

Query: 404  LAWDRSRSEWPKNS*SH 354
            L W++   +WP+N+  H
Sbjct: 2269 LFWNKDHCDWPENTECH 2285


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -2

Query: 687 AKSSXSESLITYLNFSSSGTIESIH 613
           ++SS  ESL   LNF +   +E+ H
Sbjct: 237 SESSPFESLKKSLNFRTPSCLETFH 261


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = +2

Query: 107 LEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 274
           ++ G++ R       + +L   ++ +    L  L GY+  +  L +  N++ PL++
Sbjct: 71  IQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = +2

Query: 107 LEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 274
           ++ G++ R       + +L   ++ +    L  L GY+  +  L +  N++ PL++
Sbjct: 71  IQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 11/56 (19%), Positives = 27/56 (48%)
 Frame = +2

Query: 107 LEPGQVIRPIIDHEQVKLLAERLYGISVLDLTELNGYDDKNYKLTEDPNMKNPLIT 274
           ++ G++ R       + +L   ++ +    L  L GY+  +  L +  N++ PL++
Sbjct: 71  IQRGEIGRITFGWTSIPMLYAYVFYVVTTVLVVLVGYERFDILLNKSKNLQFPLLS 126


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +1

Query: 109 GAGAGYPSDNRPRAGEATGRASLRDIRAGPDRAERLRRQELQ 234
           GAGA        +AG+        D RA   +  ++  QEL+
Sbjct: 122 GAGAAASGSAAAQAGQPDNAIEHSDYRAKLAQIRQIYHQELE 163


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,883
Number of Sequences: 336
Number of extensions: 3163
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)