Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P04_F_M07
         (468 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00015B609E Cluster: PREDICTED: hypothetical protein;...    33   4.1  
UniRef50_Q7RTF4 Cluster: Putative uncharacterized protein PY0004...    33   4.1  
UniRef50_Q8GXA7 Cluster: Putative uncharacterized protein At1g20...    31   9.5  

>UniRef50_UPI00015B609E Cluster: PREDICTED: hypothetical protein;
           n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
           protein - Nasonia vitripennis
          Length = 3240

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 17/40 (42%), Positives = 23/40 (57%)
 Frame = +3

Query: 3   QKKQKRKRCTSNEGXTVENSVVTASEVIESREIENVTTSV 122
           +KK KR++ TS    T E   V  SEV E+ E+E + T V
Sbjct: 406 KKKTKRRKTTSRRRQTTEFREVRISEVNENGELEEIVTYV 445


>UniRef50_Q7RTF4 Cluster: Putative uncharacterized protein PY00040;
            n=9; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
            protein PY00040 - Plasmodium yoelii yoelii
          Length = 5229

 Score = 32.7 bits (71), Expect = 4.1
 Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
 Frame = +1

Query: 151  KNSVARRRKT-KNKSLMKIVIIQQKLSKKQRRGQNGKIMNVSIWSQ 285
            KNS  ++ +   NKS+ K VI ++K  KK+++ +NG  +NV  +S+
Sbjct: 2694 KNSKFKKNENYSNKSMNKFVIQREKRKKKEKKLKNGDYINVLPFSK 2739


>UniRef50_Q8GXA7 Cluster: Putative uncharacterized protein
           At1g20970/F9H16_4; n=1; Arabidopsis thaliana|Rep:
           Putative uncharacterized protein At1g20970/F9H16_4 -
           Arabidopsis thaliana (Mouse-ear cress)
          Length = 163

 Score = 31.5 bits (68), Expect = 9.5
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
 Frame = +3

Query: 3   QKKQKRKRCTSNEGXTVENSVVTASEVIES-REIENVTTSVENIEDLESVE 152
           +KK++RK   ++E    EN + TA  V+E+ REIE  T   + +E+ + ++
Sbjct: 51  RKKERRKGIFTSEETATENPIPTAETVVETPREIE--TPKKQTVEESQQMK 99


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 269,103,584
Number of Sequences: 1657284
Number of extensions: 3461743
Number of successful extensions: 7959
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 7756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7950
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 25610991215
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)